Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.78□□□□□ -1.96
UPK1AO00322 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.78□□□□□ -1.96
UPK1AO00322 EIF5A2P1-201ENST00000564027 460 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 MAGOH2P-202ENST00000584384 429 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 OR4G1P-201ENST00000588632 938 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AC012493.2-201ENST00000595083 291 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.78□□□□□ -1.96
UPK1AO00322 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.78□□□□□ -1.96
UPK1AO00322 AL133393.1-201ENST00000603277 287 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AL450270.1-201ENST00000606160 391 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 OR2BH1P-201ENST00000608850 864 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AC096577.2-201ENST00000611455 153 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AC073569.3-201ENST00000619055 682 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 AC117529.2-201ENST00000512159 2068 ntBASIC2.78□□□□□ -1.96
UPK1AO00322 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.78□□□□□ -1.96
UPK1AO00322 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
UPK1AO00322 RNU6-335P-201ENST00000364563 113 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.77□□□□□ -1.97
UPK1AO00322 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
UPK1AO00322 MIR525-201ENST00000384978 85 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 AL138880.1-201ENST00000405824 642 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 U3.42-201ENST00000408746 214 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.77□□□□□ -1.97
UPK1AO00322 RPL7P46-201ENST00000425129 740 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 AL451062.2-201ENST00000427515 271 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
UPK1AO00322 MUPP-201ENST00000438111 566 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.77□□□□□ -1.97
UPK1AO00322 AL592437.1-201ENST00000443781 492 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 RPS26P56-201ENST00000444468 240 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.77□□□□□ -1.97
UPK1AO00322 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.77□□□□□ -1.97
UPK1AO00322 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.77□□□□□ -1.97
UPK1AO00322 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.77□□□□□ -1.97
UPK1AO00322 RPL5P24-201ENST00000463742 885 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 AC015724.1-201ENST00000478577 156 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 AC012181.1-201ENST00000479895 423 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 RPS4XP13-201ENST00000483219 789 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 AC068724.1-201ENST00000487100 792 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 RPL23AP55-201ENST00000498163 452 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 OR2A20P-203ENST00000498397 1268 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.77□□□□□ -1.97
UPK1AO00322 GMPSP1-201ENST00000514075 579 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 RNU6-488P-201ENST00000515918 99 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 RN7SKP282-201ENST00000516824 299 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 SNORA31.26-201ENST00000517250 137 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.77□□□□□ -1.97
UPK1AO00322 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.77□□□□□ -1.97
UPK1AO00322 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.77□□□□□ -1.97
UPK1AO00322 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.77□□□□□ -1.97
UPK1AO00322 AC006539.2-201ENST00000601729 572 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 BNIP3P11-201ENST00000603878 563 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 Z99129.2-201ENST00000619967 314 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.77□□□□□ -1.97
UPK1AO00322 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.77□□□□□ -1.97
UPK1AO00322 MIR3651-201ENST00000630427 90 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 AP003122.5-201ENST00000527668 3766 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
UPK1AO00322 FAM35BP-202ENST00000497389 3337 ntBASIC2.77□□□□□ -1.97
UPK1AO00322 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.77□□□□□ -1.97
UPK1AO00322 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.77□□□□□ -1.97
UPK1AO00322 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.77□□□□□ -1.97
UPK1AO00322 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1AO00322 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1AO00322 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1AO00322 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1AO00322 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.76□□□□□ -1.97
UPK1AO00322 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1AO00322 RNU1-35P-201ENST00000362782 153 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 SNORD46.1-201ENST00000364139 104 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.76□□□□□ -1.97
UPK1AO00322 RNU6-1005P-201ENST00000384519 107 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 MIR181A2-201ENST00000384863 110 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 NPM1P10-201ENST00000398310 865 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 RPL31P2-201ENST00000413849 377 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AC073310.1-201ENST00000423226 1033 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.76□□□□□ -1.97
UPK1AO00322 AC104978.1-201ENST00000449387 391 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1AO00322 NF1P3-201ENST00000457709 450 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 RPL21P104-201ENST00000464143 478 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AC034236.1-201ENST00000469891 373 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 SYPL1P1-201ENST00000473622 768 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AC108729.2-201ENST00000476543 840 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1AO00322 RNF138P1-201ENST00000502765 546 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 HMGB3P15-201ENST00000507326 574 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 RNU6-202P-201ENST00000515998 96 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 RN7SKP244-201ENST00000516513 307 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AC009812.2-201ENST00000517657 457 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1AO00322 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1AO00322 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.76□□□□□ -1.97
UPK1AO00322 AC012254.4-201ENST00000588843 273 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.76□□□□□ -1.97
UPK1AO00322 AC023043.3-201ENST00000593113 385 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms