Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 UBE2FP3-201ENST00000436366 524 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AL513043.1-201ENST00000439124 535 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 NDUFA12P1-201ENST00000455914 406 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 snoU13.22-201ENST00000459428 104 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 RPL35AP28-201ENST00000459730 331 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 TPT1P3-201ENST00000492841 512 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AC231760.1-201ENST00000498002 260 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AC110794.1-201ENST00000505816 425 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 ACTR6P1-201ENST00000514311 1104 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 RNA5SP364-201ENST00000516938 78 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 SARNP-203ENST00000552080 726 ntTSL 2 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 MEG8-215ENST00000555354 469 ntTSL 3 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 PARP1P2-201ENST00000556806 195 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AC051619.2-201ENST00000559063 397 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AC010546.1-201ENST00000569391 485 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR548Y-201ENST00000582739 110 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AL445567.2-201ENST00000618935 498 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AC007318.2-201ENST00000620999 243 ntBASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CHKB-CPT1BH3BT56 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC097714.1-201ENST00000511272 1647 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 CKAP2P1-201ENST00000555477 2049 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 CENPCP1-201ENST00000533085 2578 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 FAM133CP-201ENST00000332869 704 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR22-201ENST00000362190 85 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 RNA5SP120-201ENST00000410900 112 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 NFU1P1-201ENST00000413128 774 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 FNDC3CP-201ENST00000420795 1155 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 CHEK2P5-201ENST00000423877 246 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 MTCO3P30-201ENST00000426425 670 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC022018.1-201ENST00000430685 241 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 UBE2V1P13-201ENST00000436983 439 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AL772161.1-201ENST00000439130 476 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 RNF2P1-201ENST00000442955 1010 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 SNRPGP6-201ENST00000451124 220 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 HMGB1P26-201ENST00000452520 628 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 SBDSP1-204ENST00000453858 737 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU7-26P-201ENST00000458980 63 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AK6-203ENST00000502819 743 ntTSL 5 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU6-1308P-201ENST00000516817 103 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AP000867.2-201ENST00000532468 320 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC087481.2-201ENST00000565492 330 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 MTCO1P40-201ENST00000574371 625 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR4277-201ENST00000578298 84 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR5004-201ENST00000579078 107 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR2682-201ENST00000580305 110 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 MIR5092-201ENST00000583139 88 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AC107982.3-201ENST00000584957 985 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AL035413.2-201ENST00000604801 525 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AL355810.1-201ENST00000614629 552 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 AL360181.4-201ENST00000621752 134 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 CYP3A51P-201ENST00000633513 256 ntBASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHKB-CPT1BH3BT56 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CHKB-CPT1BH3BT56 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms