Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 FAM35CP-201ENST00000554755 2470 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 GSTA8P-201ENST00000404253 637 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AL024507.1-201ENST00000412741 274 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 RPL31P2-201ENST00000413849 377 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 NDUFB4P5-201ENST00000415445 361 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 SDCBPP3-201ENST00000419629 891 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 PAICSP7-201ENST00000419829 962 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AC244505.4-201ENST00000434905 287 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 SSXP5-201ENST00000443473 287 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AC005002.1-201ENST00000447458 540 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 RPS15AP1-201ENST00000457423 391 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 RPS27P23-201ENST00000487608 251 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AC118282.1-201ENST00000506408 765 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AC119751.1-201ENST00000513357 765 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 SETP12-201ENST00000514068 805 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 EIF4BP1-201ENST00000554881 351 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 LINC00557-201ENST00000563184 1279 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AL033523.1-201ENST00000605153 153 ntBASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX49Q9Y6V7 MTND5P28-201ENST00000438005 1594 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 ZNF807-201ENST00000328088 1707 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AL589826.1-201ENST00000340697 249 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 RNU4-78P-201ENST00000410940 126 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC244098.2-201ENST00000422068 99 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC092170.1-201ENST00000440211 356 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 ARPC3P2-201ENST00000457786 533 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AP001992.1-205ENST00000462248 379 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 SNORA76.2-201ENST00000517095 137 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AL121603.1-201ENST00000553815 142 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 MIR5004-201ENST00000579078 107 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC245100.7-201ENST00000609678 442 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC006386.2-201ENST00000624491 75 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC012005.1-201ENST00000624575 75 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC132825.7-201ENST00000638744 335 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 AC093908.1-201ENST00000623125 8092 ntBASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
DDX49Q9Y6V7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 MIR16-2-201ENST00000362117 81 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 RNU4-27P-201ENST00000410889 139 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AC073310.1-201ENST00000423226 1033 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AC073508.1-201ENST00000428866 656 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 HMGN2P20-201ENST00000437531 273 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 FABP5P3-201ENST00000437960 408 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 MTND4LP22-201ENST00000508209 276 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 MTCYBP41-201ENST00000528913 1123 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AC005951.1-201ENST00000576706 485 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 MIR4325-201ENST00000583049 90 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AL451007.1-201ENST00000595491 289 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 BNIP3P4-201ENST00000604946 565 ntBASIC3.75□□□□□ -1.81
DDX49Q9Y6V7 AL162274.2-201ENST00000614406 332 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms