Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 MTCO1P19-201ENST00000443487 500 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC239367.2-201ENST00000447309 705 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC079804.1-201ENST00000461922 436 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 RPS4XP10-201ENST00000465034 731 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC010618.1-201ENST00000469924 477 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AP000797.1-201ENST00000478870 387 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 HMGB1P36-201ENST00000487709 576 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC093267.1-201ENST00000489176 961 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AP001025.2-201ENST00000490908 477 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC022447.3-201ENST00000506865 495 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AL592156.1-201ENST00000508758 304 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC005921.1-201ENST00000510589 286 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 MTND3P5-201ENST00000512798 333 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 Y_RNA.655-201ENST00000515919 96 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 RN7SKP116-201ENST00000516902 319 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AP003730.1-201ENST00000524605 285 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 OR4P1P-201ENST00000530808 1136 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC100770.1-201ENST00000532310 322 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC091489.2-201ENST00000566263 604 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC012414.6-201ENST00000568241 401 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC023575.1-201ENST00000580510 358 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC090616.5-202ENST00000582111 297 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 MIR548AB-201ENST00000584917 84 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC022916.3-201ENST00000592961 742 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC012065.4-201ENST00000602445 679 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AL590392.1-201ENST00000604960 446 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AL139286.2-201ENST00000606838 396 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC006329.2-201ENST00000611491 394 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC009878.1-201ENST00000621819 340 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 MIR6830-201ENST00000636015 70 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 MARK2P15-201ENST00000432204 2186 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 MFSD8-242ENST00000641690 4199 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 MTND4P4-201ENST00000439033 1366 ntBASIC4□□□□□ -1.77
CLDN16Q9Y5I7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4□□□□□ -1.77
CLDN16Q9Y5I7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AL161781.1-201ENST00000354277 403 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 RNU6-744P-201ENST00000365557 107 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 RNU6-761P-201ENST00000384148 107 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 RNU6-1316P-201ENST00000384242 108 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 RNU4-78P-201ENST00000410940 126 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 BTF3P10-201ENST00000433415 495 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AL138799.3-201ENST00000438968 350 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 HMGN2P21-201ENST00000447764 270 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 MTCO2P18-201ENST00000457151 658 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AP001992.1-205ENST00000462248 379 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AC012158.1-204ENST00000483430 465 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 BNIP3P41-201ENST00000503774 571 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AC108475.1-201ENST00000507880 950 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 STMN1P2-201ENST00000508435 439 ntBASIC3.99□□□□□ -1.77
CLDN16Q9Y5I7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms