Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 RPL23P2-201ENST00000320371 421 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 RNA5SP335-201ENST00000363817 110 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 SNORD50.2-201ENST00000365465 70 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 Y_RNA.416-201ENST00000384014 113 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 RNU1-77P-201ENST00000390868 162 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC110754.1-201ENST00000399740 601 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC108075.1-201ENST00000424692 529 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 TRAPPC2P3-201ENST00000443200 321 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 LINC02210-201ENST00000444561 288 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 MTND1P17-201ENST00000448961 204 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC079168.1-201ENST00000458741 345 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AL049874.2-201ENST00000492636 288 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-150P-201ENST00000516237 95 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC022616.3-201ENST00000523940 148 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC122688.1-201ENST00000541494 223 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AP001029.3-201ENST00000588063 596 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 HMGB2P1-201ENST00000591146 634 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 SNORD58B-201ENST00000607313 66 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AC005344.1-201ENST00000613391 459 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AL118522.2-201ENST00000616045 615 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 AP001784.1-201ENST00000624107 428 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
PDZRN3Q9UPQ7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.28
PDZRN3Q9UPQ7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 OR56A5-201ENST00000340110 738 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.46-201ENST00000362695 102 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 RNU4-1-201ENST00000363925 141 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 SNORA70.6-201ENST00000383934 134 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 AC048351.1-201ENST00000420064 602 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 TMEM183AP1-205ENST00000432739 290 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 NDUFB4P8-201ENST00000435351 367 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 MTND6P5-201ENST00000448266 512 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 AL138752.1-201ENST00000452964 351 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 AL389915.2-201ENST00000454576 441 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 AC112492.4-201ENST00000456549 352 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 SNORA72.7-201ENST00000516349 94 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 RN7SKP99-201ENST00000517028 307 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 SNORD116.3-201ENST00000517176 78 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 U6.104-201ENST00000637979 90 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 ACTR3BP5-201ENST00000448440 1479 ntBASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.02□□□□□ -1.29
PDZRN3Q9UPQ7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AL049780.3-201ENST00000624612 1583 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-490P-201ENST00000362985 107 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.122-201ENST00000363331 96 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 SNORD27-201ENST00000363981 72 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 SNORA75.6-201ENST00000391318 127 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 MIR320C1-201ENST00000408566 88 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AC092745.2-202ENST00000411880 369 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 RPS6P23-201ENST00000413224 722 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AL590806.1-201ENST00000415818 853 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 ATG3P1-201ENST00000419507 911 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 FTH1P16-201ENST00000435241 552 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AC073910.1-201ENST00000445047 438 ntBASIC7.01□□□□□ -1.29
PDZRN3Q9UPQ7 AC073850.1-201ENST00000449243 255 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms