Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 Y_RNA.127-201ENST00000363386 109 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 RNU6-317P-201ENST00000384031 107 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AL023807.1-201ENST00000407932 359 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 RN7SKP222-201ENST00000410651 315 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 MYL6P5-201ENST00000412707 459 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 MTND3P9-201ENST00000429526 346 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 EIF5AP4-201ENST00000441206 465 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC124945.1-201ENST00000485133 188 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC083795.1-201ENST00000491760 320 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC093853.1-201ENST00000515689 483 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 RNU6-1219P-201ENST00000516143 112 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC091078.2-201ENST00000557145 559 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC008962.1-201ENST00000605729 304 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC241377.1-201ENST00000619797 406 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AL136313.1-201ENST00000624804 202 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC027088.4-201ENST00000611559 1947 ntBASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AL606537.1-201ENST00000607258 2011 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AL121835.1-201ENST00000404250 354 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 MTCYBP2-201ENST00000407745 171 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 RPS4XP5-201ENST00000419038 768 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 SNORD97-201ENST00000459187 142 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AP000926.1-201ENST00000479573 241 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AC093840.1-201ENST00000511599 336 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AL162424.1-201ENST00000602325 221 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AL049794.2-201ENST00000616301 365 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 LCOR-201ENST00000286067 4542 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AP001148.1-201ENST00000624124 2359 ntBASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.78□□□□□ -1.16
TRIM35Q9UPQ4 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.77□□□□□ -1.16
TRIM35Q9UPQ4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.77□□□□□ -1.16
TRIM35Q9UPQ4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 AC089998.1-201ENST00000548575 3141 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 RN7SKP128-201ENST00000364270 303 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 Y_RNA.435-201ENST00000384095 112 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 AL033519.2-201ENST00000403958 392 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 Y_RNA.602-201ENST00000410535 92 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 EI24P1-201ENST00000416584 867 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 AC099677.3-201ENST00000427081 395 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 AL355032.1-201ENST00000472981 438 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 RNU4-57P-201ENST00000515980 135 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 AC100870.1-201ENST00000522035 505 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 MIR4679-2-201ENST00000578358 77 ntBASIC7.77□□□□□ -1.17
TRIM35Q9UPQ4 AL670379.6-201ENST00000603753 252 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms