Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 CALM1P2-201ENST00000452941 448 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 PNPLA4P1-201ENST00000458328 305 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 RPS29P2-201ENST00000479278 136 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 FAM172BP-201ENST00000487497 1089 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 AC006960.3-201ENST00000561845 705 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 MIR4513-201ENST00000581077 86 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 AC099063.3-201ENST00000642066 185 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 AC004656.1-201ENST00000568479 4951 ntBASIC6.46□□□□□ -1.38
COL17A1Q9UMD9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 OR4G11P-202ENST00000642116 1414 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 Y_RNA.133-201ENST00000363428 110 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 Y_RNA.311-201ENST00000365068 96 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 RNU5A-6P-201ENST00000384136 116 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 MIR1284-201ENST00000408337 120 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 RNU2-3P-201ENST00000410144 191 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 ELOCP14-201ENST00000428070 331 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AC236972.1-201ENST00000433225 199 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 ELOCP7-201ENST00000439968 331 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 RPL23AP35-201ENST00000451906 501 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AP001506.1-201ENST00000615444 211 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AC006840.1-201ENST00000623069 542 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AL136164.3-201ENST00000624429 3978 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 MTND5P6-201ENST00000422338 1798 ntBASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL17A1Q9UMD9 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AL157777.2-201ENST00000258070 137 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 Y_RNA.279-201ENST00000364763 95 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 NCSTNP1-201ENST00000406229 144 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AC096664.2-201ENST00000411843 406 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 RPL23AP39-201ENST00000415533 405 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 SETP9-201ENST00000423837 832 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AL691449.1-201ENST00000426570 421 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 BRK1P2-201ENST00000442875 223 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 ARL5AP2-201ENST00000444698 533 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 RPS20P21-201ENST00000466859 343 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AC114981.1-201ENST00000503897 678 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 RNU6-406P-201ENST00000516470 107 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 HMGB1P41-201ENST00000520234 440 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AC083923.1-201ENST00000523708 376 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 MIR4666A-201ENST00000580160 79 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AL390838.2-201ENST00000602394 274 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 AL021997.2-201ENST00000615674 271 ntBASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL17A1Q9UMD9 USP9YP4-201ENST00000424401 1745 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 HMGB1P5-201ENST00000255320 642 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 Y_RNA.146-201ENST00000363549 102 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 RNU6-452P-201ENST00000384406 107 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 RPL5P18-201ENST00000406671 891 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AC013404.1-201ENST00000413068 249 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AC093716.1-201ENST00000435923 377 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms