Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 MIR5680-201ENST00000577577 84 ntBASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 MIR4509-3-201ENST00000578671 94 ntBASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 MIR4509-2-201ENST00000583920 94 ntBASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 AC091488.1-201ENST00000604239 660 ntBASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 AL050303.3-201ENST00000613704 284 ntBASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 MIR4509-1-201ENST00000618224 94 ntBASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 AC127502.3-201ENST00000636170 1206 ntBASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.33□□□□□ -1.88
APOBEC3BQ9UH17 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL512646.1-201ENST00000269395 1077 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 RNU6-236P-201ENST00000363886 106 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 SNORA72.3-201ENST00000365074 132 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 RPL23AP47-201ENST00000408017 460 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 RNU6-575P-201ENST00000411326 105 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 LIPT1P1-201ENST00000415870 1186 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 MTND4P3-201ENST00000417829 541 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL512649.1-201ENST00000428997 581 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 GTF2IP3-201ENST00000433887 494 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC006028.1-201ENST00000438379 402 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 RAB11AP1-201ENST00000442978 646 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC115115.1-201ENST00000449927 248 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 RPL23AP15-201ENST00000450202 459 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 RPL12P26-201ENST00000452430 487 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 RPL21P104-201ENST00000464143 478 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 RPL31P13-201ENST00000484151 370 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 RPL21P13-201ENST00000488305 481 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 FCF1P3-201ENST00000496394 590 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC110794.1-201ENST00000505816 425 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 HMGB3P15-201ENST00000507326 574 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC093331.1-201ENST00000521474 169 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AF279873.1-201ENST00000523393 313 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC004217.3-201ENST00000551552 878 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL163153.1-201ENST00000554223 283 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC067852.3-201ENST00000589177 561 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC012493.2-201ENST00000595083 291 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 BNIP3P38-201ENST00000601117 544 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL160237.3-201ENST00000604114 1013 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 YPEL5P2-201ENST00000605553 359 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL583856.2-201ENST00000606298 543 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AP000238.1-201ENST00000608759 426 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL157392.4-201ENST00000609756 345 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL450489.1-201ENST00000612071 468 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 MIR8057-201ENST00000620957 69 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AL109659.3-201ENST00000624985 950 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC092184.1-201ENST00000625042 715 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 ZNF542P-204ENST00000482727 1305 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 AC025263.3-201ENST00000622965 1396 ntBASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
APOBEC3BQ9UH17 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 ZNF29P-201ENST00000225587 168 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 RNU6-600P-201ENST00000362524 99 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 SNORA51.2-201ENST00000364595 132 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 SNORA48.8-201ENST00000391324 134 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AL136116.1-201ENST00000403591 381 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 SFR1P1-201ENST00000403720 688 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 PRRC2CP1-201ENST00000404428 159 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 NDUFB4P4-201ENST00000404822 243 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 RNU6-272P-201ENST00000411028 104 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 Z99755.1-201ENST00000414048 380 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC106883.1-201ENST00000418805 562 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 SFR1P2-201ENST00000421841 730 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms