Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AL450472.3-201ENST00000615578 367 ntBASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 RN7SL544P-201ENST00000617232 284 ntBASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 RN7SL763P-201ENST00000620922 284 ntBASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 AP003400.5-201ENST00000624827 617 ntBASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 TPTEP1-208ENST00000636884 213 ntBASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 MTND4P23-201ENST00000447723 1363 ntBASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 AC004817.4-201ENST00000602396 3625 ntBASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.41□□□□□ -1.54
VTI1BQ9UEU0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 MTND5P3-201ENST00000438536 1800 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 SNORA51.2-201ENST00000364595 132 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 RNA5SP510-201ENST00000364697 99 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 SNORD115-7-201ENST00000365306 82 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 OR1L6-202ENST00000373684 1044 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AL122016.1-201ENST00000403365 367 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 RNU2-43P-201ENST00000410306 190 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 SSXP9-201ENST00000417503 292 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC099677.1-201ENST00000420575 175 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 RPL19P16-201ENST00000433839 588 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC073109.1-201ENST00000445066 978 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 RPL7L1P1-201ENST00000448259 785 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC090804.1-201ENST00000448870 490 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 SNRPFP3-201ENST00000457792 225 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AP001922.4-201ENST00000526967 290 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 MIR4742-201ENST00000581069 85 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC016727.1-205ENST00000605437 569 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC110801.1-201ENST00000623590 212 ntBASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.4□□□□□ -1.54
VTI1BQ9UEU0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VTI1BQ9UEU0 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.4□□□□□ -1.55
VTI1BQ9UEU0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VTI1BQ9UEU0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.4□□□□□ -1.55
VTI1BQ9UEU0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
VTI1BQ9UEU0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
VTI1BQ9UEU0 PCAT14-202ENST00000627127 3935 ntBASIC5.4□□□□□ -1.55
VTI1BQ9UEU0 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
VTI1BQ9UEU0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC104623.2-202ENST00000623477 4002 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 MTCO1P11-201ENST00000429111 1528 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 THAP12P5-201ENST00000405864 2275 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 SOD2P1-201ENST00000396543 562 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 RNU6-387P-201ENST00000411331 105 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC068533.1-201ENST00000418542 415 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 NCOR1P3-201ENST00000420479 303 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC007161.1-204ENST00000423039 460 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC093106.2-201ENST00000428212 385 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 RPS29P14-201ENST00000431518 171 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC004866.2-201ENST00000438285 481 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AL590639.1-201ENST00000456484 337 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC010631.1-201ENST00000474150 156 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC022215.1-201ENST00000481770 362 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 COX6B1P2-201ENST00000489624 230 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC108078.2-201ENST00000510750 236 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 RNU4-49P-201ENST00000516080 140 ntBASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.39□□□□□ -1.55
VTI1BQ9UEU0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms