Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 SNORD56.3-201ENST00000363507 71 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 MIR124-3-201ENST00000384866 87 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 RNU6-584P-201ENST00000410350 95 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC004022.2-201ENST00000413824 193 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC002542.1-201ENST00000440683 193 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC010468.1-201ENST00000461022 817 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 RPL21P103-201ENST00000479921 488 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC080014.1-201ENST00000496877 1201 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AL035404.1-201ENST00000497982 568 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC006504.3-201ENST00000586818 523 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC104984.5-201ENST00000586878 94 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AL022067.1-201ENST00000602426 454 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 AC099506.2-201ENST00000623074 221 ntBASIC3.79□□□□□ -1.8
SALL1Q9NSC2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SALL1Q9NSC2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 RNA5SP107-201ENST00000411358 122 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 RPL7P53-201ENST00000421245 739 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC246680.2-201ENST00000422106 389 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 RPL23AP14-201ENST00000468281 468 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 RPS4XP22-201ENST00000480755 780 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 GTF2IP9-201ENST00000502460 301 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC097462.2-201ENST00000504623 481 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 PRELID3BP4-201ENST00000515476 571 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 HMGB1P1-201ENST00000522557 636 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC006518.2-201ENST00000542513 940 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 PCNAP1-202ENST00000595299 752 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC013468.1-201ENST00000608680 598 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC105429.2-201ENST00000610567 517 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC091046.2-201ENST00000620775 665 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 PWAR6-201ENST00000552334 4618 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SALL1Q9NSC2 SRP72P2-201ENST00000344851 1979 ntBASIC3.78□□□□□ -1.8
SALL1Q9NSC2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.81
SALL1Q9NSC2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SALL1Q9NSC2 RNU6-1339P-201ENST00000363574 91 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 RNU6-805P-201ENST00000365643 106 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 RNU6-549P-201ENST00000384433 107 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SALL1Q9NSC2 MIR1303-201ENST00000408625 86 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.77□□□□□ -1.81
SALL1Q9NSC2 USP9YP21-201ENST00000420603 432 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 ELOCP11-201ENST00000436690 332 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
SALL1Q9NSC2 AL831737.1-201ENST00000441288 271 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 AL592437.1-201ENST00000443781 492 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 ELOCP16-201ENST00000444494 332 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.77□□□□□ -1.81
SALL1Q9NSC2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.77□□□□□ -1.81
SALL1Q9NSC2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SALL1Q9NSC2 AC016696.1-201ENST00000446949 318 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 HMGB3P8-201ENST00000449709 577 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 CDC42P1-201ENST00000456658 548 ntBASIC3.77□□□□□ -1.81
SALL1Q9NSC2 SNORD108-201ENST00000459332 71 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms