Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 U8.8-201ENST00000365399 135 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 Y_RNA.541-201ENST00000384640 113 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AL513475.1-201ENST00000406602 315 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AL590399.4-201ENST00000436561 601 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC010631.1-201ENST00000474150 156 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC022206.1-201ENST00000495947 347 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC092349.1-201ENST00000504903 310 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC018645.1-201ENST00000505003 109 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 RNU6-313P-201ENST00000516317 112 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AL359219.2-201ENST00000555184 348 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 OR1F2P-201ENST00000570470 933 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC138207.8-204ENST00000579588 527 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 MIR5692A1-201ENST00000580523 69 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 AL365265.1-201ENST00000621045 234 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 MRPL57P1-201ENST00000621486 265 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 MIR6823-201ENST00000622118 61 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 LINC02495-203ENST00000636704 242 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 RLIMP1-201ENST00000339626 1680 ntBASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PRDM9Q9NQV7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PRDM9Q9NQV7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 RNU6-858P-201ENST00000362436 107 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 SNORD16-201ENST00000362803 99 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 RNU6-595P-201ENST00000363944 107 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 U3.13-201ENST00000364804 214 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 PRELID1P1-201ENST00000403549 660 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 RN7SKP86-201ENST00000410454 332 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 Y_RNA.626-201ENST00000411288 95 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 AC092809.3-201ENST00000415453 231 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 CYP4F30P-202ENST00000420048 405 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 AL159987.2-201ENST00000432754 307 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 CEACAMP1-201ENST00000434624 1035 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 RPL21P41-201ENST00000459863 264 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 RNU6-27P-201ENST00000516146 107 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 AL133399.1-201ENST00000527476 298 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 AC004024.1-201ENST00000549244 247 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 AC012368.3-201ENST00000604190 219 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 AC083837.1-201ENST00000565297 2994 ntBASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PRDM9Q9NQV7 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
PRDM9Q9NQV7 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms