Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 AC022034.3-201ENST00000471393 478 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 RN7SL326P-201ENST00000477493 296 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 RPL30P11-201ENST00000495304 339 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AP002812.1-201ENST00000495378 474 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 RN7SL808P-201ENST00000496066 299 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 HMGB1P21-201ENST00000502313 581 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AC116655.1-201ENST00000508324 901 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 Y_RNA.670-201ENST00000516255 105 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AC139365.2-201ENST00000517972 253 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AP000648.1-201ENST00000529682 397 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AP001858.2-201ENST00000536213 601 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AL138889.2-201ENST00000603883 242 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AC018462.2-201ENST00000605375 395 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 FAM157A-202ENST00000615155 405 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 AL122126.1-201ENST00000546905 1318 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GSX1Q9H4S2 EXOC5P1-201ENST00000510543 1969 ntBASIC5.13□□□□□ -1.59
GSX1Q9H4S2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 RNA5SP156-201ENST00000410250 110 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 RPL23AP38-201ENST00000423801 469 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 RPS17P13-201ENST00000448974 407 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 PCNPP5-201ENST00000452246 481 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC005008.1-201ENST00000456151 612 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 HMGB3P30-201ENST00000457863 606 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 DYNLL1P5-201ENST00000467158 270 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 GAPDHP62-201ENST00000515313 990 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 RNY3P15-201ENST00000516297 97 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 RNU6-1332P-201ENST00000516666 104 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 snoU109.6-201ENST00000516831 118 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC009852.2-201ENST00000567898 485 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC092447.9-201ENST00000603395 144 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AL365434.2-201ENST00000607979 234 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AL021918.2-201ENST00000613415 194 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 MIR6864-201ENST00000617935 70 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC138965.3-201ENST00000623875 498 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AC138627.2-201ENST00000624202 601 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AL731556.1-201ENST00000394628 3711 ntBASIC5.12□□□□□ -1.59
GSX1Q9H4S2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
GSX1Q9H4S2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.11□□□□□ -1.59
GSX1Q9H4S2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.11□□□□□ -1.59
GSX1Q9H4S2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
GSX1Q9H4S2 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GSX1Q9H4S2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
GSX1Q9H4S2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
GSX1Q9H4S2 AL078621.3-201ENST00000623707 2042 ntBASIC5.11□□□□□ -1.59
GSX1Q9H4S2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GSX1Q9H4S2 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.11□□□□□ -1.59
GSX1Q9H4S2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.11□□□□□ -1.59
GSX1Q9H4S2 RNU1-115P-201ENST00000365329 160 ntBASIC5.11□□□□□ -1.59
GSX1Q9H4S2 Y_RNA.424-201ENST00000384063 103 ntBASIC5.11□□□□□ -1.59
GSX1Q9H4S2 Y_RNA.496-201ENST00000384444 101 ntBASIC5.11□□□□□ -1.59
GSX1Q9H4S2 SNORD70.1-201ENST00000391007 85 ntBASIC5.11□□□□□ -1.59
GSX1Q9H4S2 RNU6-1109P-201ENST00000391187 107 ntBASIC5.11□□□□□ -1.59
GSX1Q9H4S2 Y_RNA.645-201ENST00000391229 102 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms