Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM4Q9C037 AL359715.4-201ENST00000606629 1436 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM4Q9C037 VTRNA1-1-201ENST00000363120 99 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 RNU2-6P-201ENST00000411404 190 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 RAP1BP1-201ENST00000412709 553 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 HMGB1P45-201ENST00000435986 653 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 MUPP-201ENST00000438111 566 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 FDX1P2-201ENST00000450769 375 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 RN7SL863P-201ENST00000462370 296 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM4Q9C037 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 AC090071.1-201ENST00000507713 644 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM4Q9C037 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 RNU6-1308P-201ENST00000516817 103 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 AF279873.1-201ENST00000523393 313 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 MIR4769-201ENST00000584126 77 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 AP003485.2-201ENST00000623636 610 ntBASIC3.04□□□□□ -1.92
TRIM4Q9C037 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.04□□□□□ -1.92
TRIM4Q9C037 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM4Q9C037 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM4Q9C037 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM4Q9C037 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.03□□□□□ -1.92
TRIM4Q9C037 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.03□□□□□ -1.92
TRIM4Q9C037 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM4Q9C037 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM4Q9C037 RNU6-618P-201ENST00000363518 112 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 RNU1-109P-201ENST00000383960 147 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 RNU6-317P-201ENST00000384031 107 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 RNA5SP129-201ENST00000410276 118 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 RNU4-47P-201ENST00000410876 114 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 RNA5SP508-201ENST00000411327 119 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 HMGN2P35-201ENST00000412164 270 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 NPM1P11-201ENST00000417106 855 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC023128.2-201ENST00000420880 1223 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.03□□□□□ -1.92
TRIM4Q9C037 XKRYP6-201ENST00000440468 1116 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 XKRYP3-201ENST00000442113 1116 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AL513124.1-201ENST00000450410 614 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC109925.1-201ENST00000478069 331 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AP001025.2-201ENST00000490908 477 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC010374.2-201ENST00000512933 535 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC017037.2-201ENST00000513850 890 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC091826.1-201ENST00000514065 313 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC034244.2-201ENST00000514668 858 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 RNU4-60P-201ENST00000517239 135 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC009812.2-201ENST00000517657 457 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.03□□□□□ -1.92
TRIM4Q9C037 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM4Q9C037 MIR3162-201ENST00000581818 82 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM4Q9C037 NRBF2P5-201ENST00000603087 788 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC090525.3-201ENST00000605601 189 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 TUG1_1.1-201ENST00000610654 145 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC087241.4-201ENST00000612441 480 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC091903.1-201ENST00000624322 454 ntBASIC3.03□□□□□ -1.92
TRIM4Q9C037 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM4Q9C037 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
TRIM4Q9C037 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM4Q9C037 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM4Q9C037 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM4Q9C037 RNU6-356P-201ENST00000384140 107 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 AL031679.1-201ENST00000400616 525 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 MRPL50P2-201ENST00000416821 482 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 MRPS33P4-201ENST00000434892 317 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 RPL23AP11-201ENST00000475260 469 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 MTCYBP37-201ENST00000510642 1133 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 MTND5P4-201ENST00000514978 288 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms