Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 HMGB3P26-201ENST00000560051 582 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 RN7SL708P-201ENST00000580952 299 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC105224.1-201ENST00000587055 421 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC098848.2-201ENST00000588023 330 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC009597.2-201ENST00000604659 592 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 HMGN2P28-201ENST00000606102 262 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC008536.2-201ENST00000607284 349 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 MIR6748-201ENST00000610433 71 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AC068870.2-201ENST00000620635 389 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 AP002505.2-201ENST00000623585 696 ntBASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TRIM55Q9BYV6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 U3.2-201ENST00000362981 210 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 SNORD56.2-201ENST00000363242 71 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RNU6-1155P-201ENST00000363554 107 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RNA5SP335-201ENST00000363817 110 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 U3.11-201ENST00000364476 212 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 Y_RNA.303-201ENST00000364998 94 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 Y_RNA.381-201ENST00000365666 102 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RNU6-39P-201ENST00000384344 107 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 MIR765-201ENST00000390226 114 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 Y_RNA.625-201ENST00000411256 107 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RPL36AP10-201ENST00000421785 322 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RGS17P1-201ENST00000423358 553 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RPL23AP38-201ENST00000423801 469 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 DPPA3P1-201ENST00000448050 469 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC140076.1-201ENST00000449897 361 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 FDX1P2-201ENST00000450769 375 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC091685.2-201ENST00000454924 864 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RPS18P6-201ENST00000476880 458 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC007686.1-201ENST00000488511 463 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RN7SL447P-201ENST00000494711 245 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC068305.1-201ENST00000497406 726 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC074344.1-201ENST00000512823 224 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC103783.1-201ENST00000520506 373 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 GLUD1P4-201ENST00000590914 418 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AL136313.1-201ENST00000624804 202 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 AC019226.1-201ENST00000625666 515 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 CYP4F35P-202ENST00000636121 390 ntBASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM55Q9BYV6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 MIR135A2-201ENST00000384854 100 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 MIR1-2-201ENST00000384961 85 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 RPS7P15-201ENST00000415804 584 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 HMGB3P12-201ENST00000438745 556 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 MTCO3P18-201ENST00000440206 761 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 H2AFZP5-201ENST00000446960 382 ntBASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM55Q9BYV6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms