Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC020898.1-201ENST00000474167 787 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 AC104986.1-201ENST00000517978 436 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 AL133457.1-201ENST00000564251 987 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 AC055876.1-202ENST00000567053 138 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 MIR5186-201ENST00000577504 120 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 AC015726.1-201ENST00000602353 681 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 AL359715.5-201ENST00000623431 443 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 MIR4275-201ENST00000636486 87 ntBASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CHMP4AQ9BY43 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AL079305.1-201ENST00000623159 3008 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 DEFB108F-201ENST00000344638 222 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 snoZ40.1-201ENST00000364540 72 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 VN1R51P-201ENST00000411675 945 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 HSPE1P28-201ENST00000443139 211 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 OR6K5P-201ENST00000447050 945 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AC022483.1-201ENST00000514020 567 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 MTCO1P49-201ENST00000523429 802 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 DEFB108D-201ENST00000527787 222 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AL606834.3-201ENST00000602615 496 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AL022099.1-201ENST00000604551 712 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AC097504.2-201ENST00000608088 454 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AC243773.3-201ENST00000613270 256 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AC025588.4-201ENST00000615802 908 ntBASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHMP4AQ9BY43 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 FRG1BP-201ENST00000278882 761 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 RPS4XP3-201ENST00000398541 413 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 RNU6ATAC-201ENST00000408749 126 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 OR4K6P-201ENST00000416478 897 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 GTF2IP23-201ENST00000423746 351 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 RANP8-201ENST00000444720 713 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AL590664.1-201ENST00000448065 339 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 HMGB3P22-202ENST00000451823 572 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 BTF3P5-201ENST00000457252 467 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AP001992.1-205ENST00000462248 379 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 RPL31P61-201ENST00000496160 376 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 RPL21P131-201ENST00000497298 483 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 PAICSP4-201ENST00000517543 1253 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 LARP7P2-201ENST00000575306 125 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AC090615.1-201ENST00000577519 154 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 DUXAP11-201ENST00000603858 526 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AL596245.1-201ENST00000618994 362 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 AC011330.2-201ENST00000621680 635 ntBASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CHMP4AQ9BY43 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 SNORD74.4-201ENST00000364129 80 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms