Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 RNA5SP131-201ENST00000365452 119 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 RNU6-903P-201ENST00000391270 109 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AL356057.3-201ENST00000402607 340 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AL592114.1-201ENST00000403842 483 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 RPS3AP2-201ENST00000407190 754 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 RNA5SP345-201ENST00000410646 108 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 RPS15AP40-201ENST00000419621 391 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AL358176.2-201ENST00000425769 204 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AL662874.1-201ENST00000426065 230 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 HMGN2P27-201ENST00000427352 270 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 RPS3AP52-201ENST00000435639 297 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AC127537.2-201ENST00000439258 465 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AL353691.1-201ENST00000451332 387 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AL445665.1-202ENST00000452436 324 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 RNU6-988P-201ENST00000519081 107 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AC027026.1-201ENST00000532323 742 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 MIR4716-201ENST00000579628 84 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AL592436.1-201ENST00000605135 558 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AC245389.1-201ENST00000605141 529 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 RNA5SP440-201ENST00000612665 119 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AC091925.1-201ENST00000623204 462 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AL034549.2-201ENST00000618285 3373 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 AC100757.1-201ENST00000616872 1835 ntBASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM56Q9BRZ2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AC235565.1-201ENST00000456962 1325 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AL139276.1-201ENST00000311910 1001 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 RNU6-1309P-201ENST00000363305 108 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 Y_RNA.187-201ENST00000363918 113 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 Y_RNA.339-201ENST00000365325 102 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AC117470.1-201ENST00000381974 330 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 RNU6-278P-201ENST00000390945 109 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 RN7SKP293-201ENST00000411389 296 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AC074085.1-201ENST00000413598 418 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 SDHDP6-201ENST00000414693 480 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 FTH1P1-201ENST00000437933 532 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 SUMO2P3-201ENST00000438311 288 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 Z95327.1-201ENST00000446082 482 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AC023141.9-201ENST00000458734 412 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 RNU7-59P-201ENST00000459101 61 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 RNU2-10P-201ENST00000516375 211 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AC090022.1-201ENST00000546569 311 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AC128657.1-201ENST00000549459 145 ntBASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
TRIM56Q9BRZ2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms