Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.23□□□□□ -1.89
ABCA3Q99758 NEAT1-202ENST00000501122 22743 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
ABCA3Q99758 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ABCA3Q99758 Y_RNA.796-201ENST00000364268 102 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 Y_RNA.799-201ENST00000364992 102 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 Y_RNA.508-201ENST00000384502 114 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ABCA3Q99758 AL162578.1-201ENST00000406202 378 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 AL450338.1-201ENST00000407987 512 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.22□□□□□ -1.89
ABCA3Q99758 AC013410.1-201ENST00000436223 1232 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.22□□□□□ -1.89
ABCA3Q99758 AC108860.1-201ENST00000484521 383 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 AC021269.2-201ENST00000532318 330 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.22□□□□□ -1.89
ABCA3Q99758 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.22□□□□□ -1.89
ABCA3Q99758 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
ABCA3Q99758 MIR148B-201ENST00000362252 99 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 Y_RNA.595-201ENST00000410403 105 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.22□□□□□ -1.89
ABCA3Q99758 AL592045.1-201ENST00000429867 352 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 RPS27P29-201ENST00000463110 252 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 RPL23AP11-201ENST00000475260 469 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.22□□□□□ -1.89
ABCA3Q99758 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.22□□□□□ -1.89
ABCA3Q99758 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.22□□□□□ -1.89
ABCA3Q99758 CKS1BP1-201ENST00000555221 240 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.22□□□□□ -1.89
ABCA3Q99758 AP000942.3-201ENST00000603702 160 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.22□□□□□ -1.89
ABCA3Q99758 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.22□□□□□ -1.89
ABCA3Q99758 AL021368.2-201ENST00000606125 5352 ntBASIC3.21□□□□□ -1.89
ABCA3Q99758 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.21□□□□□ -1.9
ABCA3Q99758 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.21□□□□□ -1.9
ABCA3Q99758 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.21□□□□□ -1.9
ABCA3Q99758 SNORA70E-201ENST00000384492 135 ntBASIC3.21□□□□□ -1.9
ABCA3Q99758 RNA5SP210-201ENST00000391034 120 ntBASIC3.21□□□□□ -1.9
ABCA3Q99758 MORF4L1P6-201ENST00000418771 268 ntBASIC3.21□□□□□ -1.9
ABCA3Q99758 IFNWP4-201ENST00000453148 294 ntBASIC3.21□□□□□ -1.9
ABCA3Q99758 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.21□□□□□ -1.9
ABCA3Q99758 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.21□□□□□ -1.9
ABCA3Q99758 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.21□□□□□ -1.9
ABCA3Q99758 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.21□□□□□ -1.9
ABCA3Q99758 MIR6873-201ENST00000622788 63 ntBASIC3.21□□□□□ -1.9
ABCA3Q99758 AC005539.1-201ENST00000443768 1479 ntBASIC3.21□□□□□ -1.9
ABCA3Q99758 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.21□□□□□ -1.9
ABCA3Q99758 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ABCA3Q99758 AL592437.2-201ENST00000421655 2434 ntBASIC3.21□□□□□ -1.9
ABCA3Q99758 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
ABCA3Q99758 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ABCA3Q99758 ZNF355P-201ENST00000427301 3216 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
ABCA3Q99758 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ABCA3Q99758 RAD1P1-201ENST00000231383 813 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ABCA3Q99758 USP9YP20-201ENST00000419224 558 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.2□□□□□ -1.9
ABCA3Q99758 Z98742.2-201ENST00000431564 187 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 AC010881.1-201ENST00000433830 235 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 BTG3P1-201ENST00000435859 716 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.2□□□□□ -1.9
ABCA3Q99758 AC104389.3-201ENST00000445629 235 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 NDUFS5P3-201ENST00000450668 321 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 AP000926.3-201ENST00000497201 299 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.2□□□□□ -1.9
ABCA3Q99758 RN7SKP219-201ENST00000516825 296 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 CKS1BP7-201ENST00000522230 235 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 OR5BN1P-201ENST00000532955 829 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.2□□□□□ -1.9
ABCA3Q99758 MIR3186-201ENST00000577404 85 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.2□□□□□ -1.9
ABCA3Q99758 AP001521.1-201ENST00000609150 300 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 MIR1291-201ENST00000627649 87 ntBASIC3.2□□□□□ -1.9
ABCA3Q99758 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.2□□□□□ -1.9
ABCA3Q99758 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
ABCA3Q99758 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ABCA3Q99758 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
ABCA3Q99758 EIF5P1-201ENST00000400019 1231 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ABCA3Q99758 MTCO3P31-201ENST00000405526 789 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 AC124916.1-201ENST00000444020 547 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 ST13P20-201ENST00000447996 1065 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 TRBV1-201ENST00000476502 284 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 RN7SL297P-201ENST00000483161 293 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 MIR5092-201ENST00000583139 88 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.19□□□□□ -1.9
ABCA3Q99758 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ABCA3Q99758 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
ABCA3Q99758 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ABCA3Q99758 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.19□□□□□ -1.9
ABCA3Q99758 Y_RNA.269-201ENST00000364685 89 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 Y_RNA.338-201ENST00000365320 114 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ABCA3Q99758 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 MTND4LP12-201ENST00000448237 295 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 AL645939.1-201ENST00000453429 797 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 RPL23AP14-201ENST00000468281 468 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 RPL23AP70-201ENST00000483361 460 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms