Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAS2Q99743 AL121603.1-201ENST00000553815 142 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.31□□□□□ -1.88
NPAS2Q99743 MIR5047-201ENST00000579212 100 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAS2Q99743 SRGNP1-201ENST00000603392 451 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AC007179.3-201ENST00000604976 235 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAS2Q99743 AP005229.2-201ENST00000609980 697 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AL450489.1-201ENST00000612071 468 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAS2Q99743 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.31□□□□□ -1.88
NPAS2Q99743 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NPAS2Q99743 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPAS2Q99743 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPAS2Q99743 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.3□□□□□ -1.88
NPAS2Q99743 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NPAS2Q99743 RNU6-50P-201ENST00000362356 103 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 RNU6-805P-201ENST00000365643 106 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 OR6K3-202ENST00000368146 996 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NPAS2Q99743 RNA5SP293-201ENST00000410527 113 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 AC126124.2-201ENST00000413542 321 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.3□□□□□ -1.88
NPAS2Q99743 SFR1P2-201ENST00000421841 730 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 AL035410.1-201ENST00000427409 427 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.3□□□□□ -1.88
NPAS2Q99743 AL512637.2-201ENST00000431287 1256 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.3□□□□□ -1.88
NPAS2Q99743 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.3□□□□□ -1.88
NPAS2Q99743 AC097262.1-201ENST00000452559 548 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.3□□□□□ -1.88
NPAS2Q99743 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.3□□□□□ -1.88
NPAS2Q99743 RPS4XP10-201ENST00000465034 731 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 RPL23AP67-201ENST00000465341 474 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.3□□□□□ -1.88
NPAS2Q99743 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.3□□□□□ -1.88
NPAS2Q99743 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.3□□□□□ -1.88
NPAS2Q99743 RNU6-334P-201ENST00000517072 102 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.3□□□□□ -1.88
NPAS2Q99743 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NPAS2Q99743 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.3□□□□□ -1.88
NPAS2Q99743 AC037471.2-201ENST00000564941 598 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.3□□□□□ -1.88
NPAS2Q99743 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.3□□□□□ -1.88
NPAS2Q99743 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.3□□□□□ -1.88
NPAS2Q99743 AC006116.10-201ENST00000591836 581 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.3□□□□□ -1.88
NPAS2Q99743 AC069209.1-201ENST00000619282 651 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 AL136164.4-201ENST00000625013 2135 ntBASIC3.3□□□□□ -1.88
NPAS2Q99743 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPAS2Q99743 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.3□□□□□ -1.88
NPAS2Q99743 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPAS2Q99743 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPAS2Q99743 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.3□□□□□ -1.88
NPAS2Q99743 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.3□□□□□ -1.88
NPAS2Q99743 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS2Q99743 AC032011.1-201ENST00000611703 1549 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.29□□□□□ -1.88
NPAS2Q99743 AC244517.1-201ENST00000606030 2086 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.29□□□□□ -1.88
NPAS2Q99743 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.29□□□□□ -1.88
NPAS2Q99743 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS2Q99743 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.29□□□□□ -1.88
NPAS2Q99743 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS2Q99743 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS2Q99743 RPL7P26-201ENST00000333817 754 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS2Q99743 RNU6-251P-201ENST00000363235 104 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS2Q99743 SNORD116-23-201ENST00000384645 92 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 RNVU1-14-201ENST00000384770 164 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 MIR591-201ENST00000385290 95 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 RPL22P22-201ENST00000395439 379 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.29□□□□□ -1.88
NPAS2Q99743 Z99755.1-201ENST00000414048 380 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.29□□□□□ -1.88
NPAS2Q99743 RPL23AP83-201ENST00000434984 473 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 ISCA1P2-201ENST00000438679 421 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 HMGB3P11-201ENST00000440127 604 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 AL096829.2-201ENST00000446582 742 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 NECAP1P2-201ENST00000455668 727 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 snoU13.4-201ENST00000458916 104 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 RPS27P29-201ENST00000463110 252 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.29□□□□□ -1.88
NPAS2Q99743 PABPC1P3-201ENST00000469174 459 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 RPS27AP1-201ENST00000475545 471 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 AC025518.1-201ENST00000479856 347 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.29□□□□□ -1.88
NPAS2Q99743 AC114967.1-201ENST00000504890 259 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 TXNP6-201ENST00000510190 310 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 MTCYBP37-201ENST00000510642 1133 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 AC109471.1-201ENST00000511631 612 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 RNU1-61P-201ENST00000516107 151 ntBASIC3.29□□□□□ -1.88
NPAS2Q99743 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.29□□□□□ -1.88
NPAS2Q99743 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.29□□□□□ -1.88
NPAS2Q99743 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.29□□□□□ -1.88
NPAS2Q99743 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms