Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RPL26P30-202ENST00000602923 645 ntBASIC4.78□□□□□ -1.64
HPS3Q969F9 LLPHP1-201ENST00000603571 367 ntBASIC4.78□□□□□ -1.64
HPS3Q969F9 AC113403.1-201ENST00000604910 193 ntBASIC4.78□□□□□ -1.64
HPS3Q969F9 AC010680.4-201ENST00000605334 543 ntBASIC4.78□□□□□ -1.64
HPS3Q969F9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.78□□□□□ -1.64
HPS3Q969F9 AC090948.1-201ENST00000607464 549 ntBASIC4.78□□□□□ -1.64
HPS3Q969F9 AC009509.4-201ENST00000619202 509 ntBASIC4.78□□□□□ -1.64
HPS3Q969F9 AC055839.1-201ENST00000634467 498 ntBASIC4.78□□□□□ -1.64
HPS3Q969F9 AC008013.2-202ENST00000637965 364 ntBASIC4.78□□□□□ -1.64
HPS3Q969F9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HPS3Q969F9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS3Q969F9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS3Q969F9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
HPS3Q969F9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS3Q969F9 MTCO1P24-201ENST00000515438 1558 ntBASIC4.78□□□□□ -1.64
HPS3Q969F9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS3Q969F9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HPS3Q969F9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
HPS3Q969F9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS3Q969F9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HPS3Q969F9 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 RPL32P3-201ENST00000359025 275 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 RNU6-343P-201ENST00000364709 104 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS3Q969F9 ELOCP19-201ENST00000411919 318 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS3Q969F9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS3Q969F9 EIF4EP1-201ENST00000422311 642 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 AC005517.2-201ENST00000424673 553 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 AC007742.1-201ENST00000425789 329 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 ELOCP26-201ENST00000436067 329 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 RSU1P2-202ENST00000437884 485 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 CBX1P1-201ENST00000440184 427 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AL590399.6-201ENST00000446396 307 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 AP000542.1-201ENST00000448473 371 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 USP9YP12-201ENST00000450481 570 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 MTND1P27-201ENST00000451117 902 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.77□□□□□ -1.65
HPS3Q969F9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
HPS3Q969F9 RN7SL98P-201ENST00000462271 300 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AC023424.2-201ENST00000493479 777 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AC093677.1-201ENST00000514414 678 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 RN7SKP116-201ENST00000516902 319 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AP003385.6-201ENST00000531603 374 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.77□□□□□ -1.65
HPS3Q969F9 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AC136624.4-201ENST00000573044 370 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AC112230.1-201ENST00000604342 547 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS3Q969F9 AC019278.1-201ENST00000623516 479 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS3Q969F9 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HPS3Q969F9 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.77□□□□□ -1.65
HPS3Q969F9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HPS3Q969F9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.77□□□□□ -1.65
HPS3Q969F9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.77□□□□□ -1.65
HPS3Q969F9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HPS3Q969F9 AC092447.10-201ENST00000620607 1652 ntBASIC4.77□□□□□ -1.65
HPS3Q969F9 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HPS3Q969F9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HPS3Q969F9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
HPS3Q969F9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS3Q969F9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS3Q969F9 RNA5SP175-201ENST00000364275 119 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 RNU4-75P-201ENST00000364621 146 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HPS3Q969F9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS3Q969F9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HPS3Q969F9 RNU6-761P-201ENST00000384148 107 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 RNU6-1119P-201ENST00000384349 108 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 RNU6-809P-201ENST00000384461 107 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 OR6C69P-201ENST00000394268 893 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 AL356421.1-201ENST00000403255 413 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 Y_RNA.598-201ENST00000410480 95 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.76□□□□□ -1.65
HPS3Q969F9 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.76□□□□□ -1.65
HPS3Q969F9 AL513174.1-201ENST00000423182 629 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS3Q969F9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HPS3Q969F9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS3Q969F9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS3Q969F9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.76□□□□□ -1.65
HPS3Q969F9 GDI2P2-201ENST00000445131 608 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 RPL23AP24-201ENST00000458203 385 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 HMGB1P36-201ENST00000487709 576 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS3Q969F9 AC112204.1-201ENST00000502591 103 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 AC108145.1-201ENST00000503770 153 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms