Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 PNPLA4P1-201ENST00000458328 305 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 RPL31P13-201ENST00000484151 370 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 NCOR1P1-202ENST00000486162 291 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AL139099.1-201ENST00000497398 403 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 HMGB1P22-201ENST00000505315 124 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC108064.1-201ENST00000513791 460 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC034205.1-201ENST00000520621 638 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AP001189.2-201ENST00000527320 189 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 MTCYBP41-201ENST00000528913 1123 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 GTF2IP8-201ENST00000560687 584 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 LARP7P2-201ENST00000575306 125 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC015688.2-201ENST00000584523 262 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 MIR6716-201ENST00000613413 80 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC099654.9-201ENST00000637055 678 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC093908.1-201ENST00000623125 8092 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 RNVU1-3-201ENST00000364313 161 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 Y_RNA.408-201ENST00000383987 102 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 SNORA70C-201ENST00000384538 135 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 RNU6-925P-201ENST00000384629 104 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 MIR506-201ENST00000384998 124 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AL138880.1-201ENST00000405824 642 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AL450338.1-201ENST00000407987 512 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 RNU2-28P-201ENST00000410457 189 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 BMS1P22-201ENST00000414726 313 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 NANOGP2-201ENST00000435391 727 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 USP9YP22-201ENST00000438971 294 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 OR10R1P-201ENST00000441524 1141 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 RFC5P1-201ENST00000454419 874 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC091179.1-201ENST00000461606 579 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 RN7SL75P-201ENST00000461926 281 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC091564.1-201ENST00000464563 479 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 RPL21P131-201ENST00000497298 483 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC093767.1-201ENST00000504523 156 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC113347.3-201ENST00000509113 148 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC023141.12-201ENST00000512399 199 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 RNU1-143P-201ENST00000516296 146 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AP004242.1-201ENST00000533701 349 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC055876.1-202ENST00000567053 138 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 MAGOH2P-202ENST00000584384 429 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AL160237.3-201ENST00000604114 1013 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 U1.23-201ENST00000610293 146 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 RNU1-68P-201ENST00000615382 146 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 U1.39-201ENST00000621562 146 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 LINC02211-204ENST00000642024 1070 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 AL356274.2-201ENST00000624379 3752 ntBASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TRUB1Q8WWH5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 SNORD82-201ENST00000365530 70 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 MIR30B-201ENST00000384850 88 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 RNU6-837P-201ENST00000391056 108 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 U3.29-201ENST00000391296 212 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 RPL7P60-201ENST00000397636 735 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 EIF5P1-201ENST00000400019 1231 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 AL121972.1-201ENST00000402023 252 ntBASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRUB1Q8WWH5 RNU2-37P-201ENST00000410695 177 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms