Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU1-112P-201ENST00000364401 164 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 RNU6-301P-201ENST00000384277 107 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 MIR512-1-201ENST00000384913 84 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 RPL23AP22-201ENST00000437556 453 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 SLC31A1P1-201ENST00000451221 567 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC126389.1-201ENST00000477436 290 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 RPL31P13-201ENST00000484151 370 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 OR8L1P-201ENST00000534005 955 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 ZNF92P3-201ENST00000596594 954 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC242628.1-201ENST00000606810 391 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC016911.1-201ENST00000613297 452 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 ZNF90P1-201ENST00000480493 1951 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 RNA5SP126-201ENST00000365092 109 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AP000567.1-201ENST00000406413 156 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 RNU4-74P-201ENST00000411280 161 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AL139413.1-201ENST00000421309 217 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 NPM1P49-201ENST00000448027 714 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AP002345.1-201ENST00000456493 928 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 RN7SL429P-201ENST00000479090 223 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 RN7SL489P-201ENST00000486185 223 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 RN7SL327P-201ENST00000488659 223 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 KCTD9P5-201ENST00000504141 1170 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AC114781.4-201ENST00000513707 639 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 SNORA31.21-201ENST00000517180 77 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 HPRT1P3-201ENST00000539521 576 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AC021755.1-201ENST00000559747 1447 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AC005156.1-201ENST00000613371 573 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 RN7SL853P-201ENST00000617250 223 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AC092184.1-201ENST00000625042 715 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMX1AQ8TE12 AC011978.2-201ENST00000569835 2054 ntBASIC2.72□□□□□ -1.97
LMX1AQ8TE12 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
LMX1AQ8TE12 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 RNU6-859P-201ENST00000362728 107 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 RNU1-35P-201ENST00000362782 153 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 RNU6-452P-201ENST00000384406 107 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 MIR34A-201ENST00000385130 110 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 RN7SKP58-201ENST00000411010 305 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 EI24P1-201ENST00000416584 867 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AP000936.2-201ENST00000447151 681 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC005351.1-201ENST00000511152 786 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 RN7SKP43-201ENST00000516173 320 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 RNU6-889P-201ENST00000517189 103 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC068657.1-201ENST00000520807 306 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC010735.1-201ENST00000567305 1026 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC011468.4-201ENST00000603942 409 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC026790.2-201ENST00000606282 430 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 LINC00216-201ENST00000623548 1126 ntBASIC2.71□□□□□ -1.98
LMX1AQ8TE12 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.71□□□□□ -1.98
LMX1AQ8TE12 AC092593.1-201ENST00000515413 1815 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 RNU4-82P-201ENST00000362443 140 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 MIR9-1-201ENST00000385198 89 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 MIR607-201ENST00000385241 96 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 Z86062.1-201ENST00000406773 777 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms