Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.46□□□□□ -1.7
USP38Q8NB14 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.46□□□□□ -1.7
USP38Q8NB14 MTND2P41-201ENST00000637599 773 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AC130650.2-201ENST00000618736 2403 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP38Q8NB14 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP38Q8NB14 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
USP38Q8NB14 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP38Q8NB14 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
USP38Q8NB14 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP38Q8NB14 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP38Q8NB14 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.45□□□□□ -1.7
USP38Q8NB14 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.45□□□□□ -1.7
USP38Q8NB14 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.45□□□□□ -1.7
USP38Q8NB14 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP38Q8NB14 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP38Q8NB14 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP38Q8NB14 RNY3P9-201ENST00000384727 106 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 RPL23AP29-201ENST00000397284 453 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 RSL24D1P4-201ENST00000400938 484 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 SNORA3C-201ENST00000408792 125 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 RPS29P4-201ENST00000414733 161 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.45□□□□□ -1.7
USP38Q8NB14 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.45□□□□□ -1.7
USP38Q8NB14 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.45□□□□□ -1.7
USP38Q8NB14 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.45□□□□□ -1.7
USP38Q8NB14 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP38Q8NB14 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.45□□□□□ -1.7
USP38Q8NB14 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.45□□□□□ -1.7
USP38Q8NB14 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.45□□□□□ -1.7
USP38Q8NB14 UBE2DNL-203ENST00000474922 222 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 RN7SL293P-201ENST00000481765 281 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 RPS3AP22-201ENST00000488297 769 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.45□□□□□ -1.7
USP38Q8NB14 AC093767.1-201ENST00000504523 156 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AC010486.2-201ENST00000505572 483 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.45□□□□□ -1.7
USP38Q8NB14 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.45□□□□□ -1.7
USP38Q8NB14 AC093853.1-201ENST00000515689 483 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 IGHV3-32-201ENST00000519182 355 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.45□□□□□ -1.7
USP38Q8NB14 RFPL1S-203ENST00000539579 330 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 UBE2NP1-201ENST00000545592 458 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 CENPUP2-201ENST00000555897 1186 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.45□□□□□ -1.7
USP38Q8NB14 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP38Q8NB14 AC007599.1-201ENST00000568688 1174 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AC025627.2-201ENST00000576220 160 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AP001180.3-201ENST00000582221 145 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.45□□□□□ -1.7
USP38Q8NB14 MAGOH2P-202ENST00000584384 429 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.45□□□□□ -1.7
USP38Q8NB14 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.45□□□□□ -1.7
USP38Q8NB14 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.45□□□□□ -1.7
USP38Q8NB14 AC004987.4-201ENST00000603383 338 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AC025946.2-201ENST00000603398 234 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AC010680.4-201ENST00000605334 543 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 MIR6868-201ENST00000611215 58 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AL450489.1-201ENST00000612071 468 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 uc_338.32-201ENST00000615087 172 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AL136981.2-201ENST00000617319 734 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 FP236240.3-201ENST00000623061 327 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.45□□□□□ -1.7
USP38Q8NB14 U6.101-201ENST00000637707 76 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.45□□□□□ -1.7
USP38Q8NB14 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.45□□□□□ -1.7
USP38Q8NB14 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.45□□□□□ -1.7
USP38Q8NB14 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP38Q8NB14 AC007685.1-201ENST00000329806 452 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 RNU6-253P-201ENST00000384730 105 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 ARF4P3-201ENST00000397387 509 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 RPL21P17-201ENST00000397467 475 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.44□□□□□ -1.7
USP38Q8NB14 CKS1BP5-201ENST00000434172 273 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.44□□□□□ -1.7
USP38Q8NB14 AL591503.2-201ENST00000442314 1005 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.44□□□□□ -1.7
USP38Q8NB14 RPL23AP35-201ENST00000451906 501 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 OR9M1P-201ENST00000459641 921 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 LINC00888-204ENST00000487386 421 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP38Q8NB14 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.44□□□□□ -1.7
USP38Q8NB14 FTH1P9-201ENST00000513251 355 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 RNU6-352P-201ENST00000516908 107 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 RN7SKP57-201ENST00000517248 293 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 IGKV2D-36-201ENST00000518643 226 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.44□□□□□ -1.7
USP38Q8NB14 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.44□□□□□ -1.7
USP38Q8NB14 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.44□□□□□ -1.7
USP38Q8NB14 CYCSP30-201ENST00000546447 172 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
USP38Q8NB14 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.44□□□□□ -1.7
USP38Q8NB14 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.44□□□□□ -1.7
USP38Q8NB14 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.44□□□□□ -1.7
USP38Q8NB14 LLPHP1-201ENST00000603571 367 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 AC105429.2-201ENST00000610567 517 ntBASIC4.44□□□□□ -1.7
USP38Q8NB14 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.44□□□□□ -1.7
USP38Q8NB14 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
USP38Q8NB14 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
USP38Q8NB14 MTND5P24-201ENST00000438892 1767 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms