Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 RPS24P8-201ENST00000431490 402 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC004865.1-201ENST00000442276 1003 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 MTND6P13-201ENST00000443510 523 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 RPS29P25-201ENST00000481709 171 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 RPL35P6-201ENST00000490024 372 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC091951.2-201ENST00000500762 203 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC008958.1-201ENST00000511047 682 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AF131216.2-201ENST00000512316 564 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 RNU6-875P-201ENST00000516488 106 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 RNU6-358P-201ENST00000516564 75 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 RNA5SP143-201ENST00000516936 115 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 RNU1-45P-201ENST00000517191 141 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 IGKV2-36-201ENST00000519999 223 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 COX6B1P6-201ENST00000522347 255 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC068587.4-201ENST00000533893 186 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 MIR4286-201ENST00000580651 93 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 PRELID3BP8-201ENST00000604148 295 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC010200.2-201ENST00000605098 235 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 MIR6891-201ENST00000618788 93 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 AC006378.2-201ENST00000623178 2476 ntBASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC44A3Q8N4M1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 MAPK10-349ENST00000641767 3661 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 CBX3P1-201ENST00000325243 554 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RNU6-1090P-201ENST00000364065 94 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RNU6-534P-201ENST00000364877 106 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 Y_RNA.402-201ENST00000383972 102 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RNU6-317P-201ENST00000384031 107 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 GSTA9P-201ENST00000406231 611 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RNA5SP44-201ENST00000410446 133 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RNU6-272P-201ENST00000411028 104 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AL513174.1-201ENST00000423182 629 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 MTND1P14-201ENST00000427400 950 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 TIMM9P3-201ENST00000428659 274 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 DYNLL1P7-201ENST00000429273 258 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC009961.2-201ENST00000435771 251 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC073614.1-201ENST00000438690 650 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RPL23AP52-201ENST00000439311 478 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RPL21P89-201ENST00000444021 467 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AL358232.1-201ENST00000448030 501 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 MTCO1P27-201ENST00000448269 226 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AP000542.1-201ENST00000448473 371 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 GAPDHP17-201ENST00000449858 1001 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 UBDP1-202ENST00000457888 382 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RPL38P1-201ENST00000460914 211 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC097493.1-201ENST00000463958 372 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC008628.2-201ENST00000502605 298 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 OR5H5P-201ENST00000503164 928 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 HMGB1P29-201ENST00000505659 499 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 STMN1P2-201ENST00000508435 439 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC009646.1-201ENST00000510455 318 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC108471.1-201ENST00000513977 287 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC046134.1-201ENST00000514454 666 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RNA5SP249-201ENST00000516127 99 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 AC018442.3-201ENST00000523025 183 ntBASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SLC44A3Q8N4M1 GLYCAM1-201ENST00000546596 285 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms