Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 PABPC1P7-201ENST00000413177 1513 ntBASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDKL3Q8IVW4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AL512646.1-201ENST00000269395 1077 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AC073325.2-201ENST00000339545 159 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 RNA5SP72-201ENST00000364442 117 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 SNORA51.12-201ENST00000384448 134 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 MIR34B-201ENST00000385076 84 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 RPL31P1-201ENST00000398116 372 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AL591034.1-201ENST00000407447 340 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 TATDN1P1-201ENST00000414123 891 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AL357078.2-201ENST00000416486 427 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 UBE2V1P1-201ENST00000430836 445 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AC016065.2-201ENST00000514530 444 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 C1DP5-201ENST00000525775 383 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AL442163.2-201ENST00000553912 710 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AC012182.1-201ENST00000570133 895 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 BDH2P1-201ENST00000602288 736 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AL021368.1-201ENST00000607490 540 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 MIR7112-201ENST00000616126 65 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.12□□□□□ -1.91
CDKL3Q8IVW4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 MTND5P7-201ENST00000413558 1798 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 RNU4-65P-201ENST00000410473 140 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AL158156.1-201ENST00000422509 473 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AC068135.1-201ENST00000446164 246 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 SYPL1P1-201ENST00000473622 768 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 HSPD1P15-201ENST00000505573 1122 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AC008885.2-201ENST00000509506 930 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 SNORD84-203ENST00000584275 78 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AL161756.2-201ENST00000604597 246 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 KATNBL1P5-201ENST00000605015 517 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AP001033.2-201ENST00000609701 1003 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AC083865.1-201ENST00000636634 831 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 OR5BR1P-201ENST00000524992 1330 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AL035425.3-201ENST00000564206 4996 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 AC093010.3-201ENST00000570269 15214 ntBASIC3.11□□□□□ -1.91
CDKL3Q8IVW4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 RPL5P18-201ENST00000406671 891 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 RNA5SP120-201ENST00000410900 112 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 KRR1P1-201ENST00000419430 803 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 SETP8-201ENST00000435341 628 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 NPM1P13-201ENST00000452663 865 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AL035407.2-201ENST00000454090 378 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 AL136126.1-201ENST00000473603 402 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 RPL7P23-201ENST00000493874 747 ntBASIC3.1□□□□□ -1.91
CDKL3Q8IVW4 HMGB1P22-201ENST00000505315 124 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms