Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 BTF3P9-201ENST00000418784 283 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 RPL35AP12-201ENST00000425362 338 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.55□□□□□ -2
LRRC28Q86X40 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LRRC28Q86X40 PSMA2P3-201ENST00000429685 675 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 RPL23AP58-201ENST00000440453 469 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 RSL24D1P3-201ENST00000449255 495 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.55□□□□□ -2
LRRC28Q86X40 HMGN1P8-201ENST00000463578 288 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.55□□□□□ -2
LRRC28Q86X40 HMGB1P38-201ENST00000490557 577 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 RPL21P131-201ENST00000497298 483 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 OR2A20P-203ENST00000498397 1268 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.55□□□□□ -2
LRRC28Q86X40 PRELID3BP6-201ENST00000503839 571 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.55□□□□□ -2
LRRC28Q86X40 AC090071.1-201ENST00000507713 644 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LRRC28Q86X40 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.55□□□□□ -2
LRRC28Q86X40 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.55□□□□□ -2
LRRC28Q86X40 RNU6-1308P-201ENST00000516817 103 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 AC009812.2-201ENST00000517657 457 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.55□□□□□ -2
LRRC28Q86X40 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.55□□□□□ -2
LRRC28Q86X40 OR4A45P-201ENST00000529954 901 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.55□□□□□ -2
LRRC28Q86X40 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.55□□□□□ -2
LRRC28Q86X40 AC093014.1-201ENST00000548926 724 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.55□□□□□ -2
LRRC28Q86X40 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.55□□□□□ -2
LRRC28Q86X40 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.55□□□□□ -2
LRRC28Q86X40 AP001350.1-201ENST00000601906 1524 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 BNIP3P11-201ENST00000603878 563 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 AC006378.2-201ENST00000623178 2476 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 AP000676.4-201ENST00000624659 623 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
LRRC28Q86X40 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.55□□□□□ -2
LRRC28Q86X40 AC000403.1-201ENST00000613696 3585 ntBASIC2.55□□□□□ -2
LRRC28Q86X40 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRC28Q86X40 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRC28Q86X40 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRC28Q86X40 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRC28Q86X40 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRC28Q86X40 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
LRRC28Q86X40 OR5H2-201ENST00000355273 945 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 SNORA54-201ENST00000384281 123 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 RNU6-31P-201ENST00000384388 108 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 MIR512-1-201ENST00000384913 84 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 RNU6-244P-201ENST00000391028 104 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 UBA52P6-201ENST00000399822 382 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 DNAJC19P6-201ENST00000401853 280 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 RPL7P44-201ENST00000424827 742 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AC005189.1-201ENST00000431286 310 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 ARL5AP3-201ENST00000439327 386 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
LRRC28Q86X40 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AL513343.1-201ENST00000451818 792 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.54□□□□□ -2
LRRC28Q86X40 AP001025.2-201ENST00000490908 477 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 HMGB1P3-201ENST00000502802 616 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRC28Q86X40 RNU6-1004P-201ENST00000516584 111 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 FAM60DP-201ENST00000524174 632 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AC113192.3-201ENST00000529152 742 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.54□□□□□ -2
LRRC28Q86X40 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.54□□□□□ -2
LRRC28Q86X40 HSPE1P20-201ENST00000538133 289 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AC022080.3-201ENST00000544433 482 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AL355836.1-201ENST00000555951 870 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.54□□□□□ -2
LRRC28Q86X40 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.54□□□□□ -2
LRRC28Q86X40 AP004372.1-201ENST00000604842 844 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AC093732.2-201ENST00000607950 274 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AC135803.1-201ENST00000608748 565 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 CYCSP41-201ENST00000616920 296 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AC006249.1-201ENST00000621223 471 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.54□□□□□ -2
LRRC28Q86X40 AC015726.3-201ENST00000624501 418 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 AC009039.2-201ENST00000624524 529 ntBASIC2.54□□□□□ -2
LRRC28Q86X40 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRRC28Q86X40 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
LRRC28Q86X40 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.54□□□□□ -2
LRRC28Q86X40 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.53□□□□□ -2
LRRC28Q86X40 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.53□□□□□ -2
LRRC28Q86X40 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.53□□□□□ -2
LRRC28Q86X40 RNU1-109P-201ENST00000383960 147 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 NDUFB4P4-201ENST00000404822 243 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.53□□□□□ -2
LRRC28Q86X40 RNU6-1077P-201ENST00000410506 102 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 RPL26P37-201ENST00000411983 438 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 RAD23BP2-201ENST00000416003 1207 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 AC022018.1-201ENST00000430685 241 ntBASIC2.53□□□□□ -2
LRRC28Q86X40 NDUFA5P10-201ENST00000432147 357 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms