Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AL353600.1-201ENST00000608148 251 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 U4.6-201ENST00000621618 127 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 AC026634.1-201ENST00000634369 198 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 LINC01109-201ENST00000603837 3081 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 XPOTP1-201ENST00000443317 2398 ntBASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRT28Q7Z3Y7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
KRT28Q7Z3Y7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRT28Q7Z3Y7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
KRT28Q7Z3Y7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-1200P-201ENST00000384162 107 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-178P-201ENST00000384631 104 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-253P-201ENST00000384730 105 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AL512430.2-201ENST00000406786 339 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 RPL31P52-201ENST00000407532 367 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC092634.6-201ENST00000418558 192 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC005345.1-201ENST00000431868 217 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC241584.1-201ENST00000438469 1241 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AL831737.1-201ENST00000441288 271 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 RPL30P11-201ENST00000495304 339 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 MTND1P22-201ENST00000510572 951 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 HNRNPKP5-201ENST00000515300 253 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 EIF4BP1-201ENST00000554881 351 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 TRAV15-201ENST00000556680 249 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 ISCA1P3-201ENST00000577104 373 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC122133.1-201ENST00000613964 233 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC091931.1-201ENST00000623488 728 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC079248.2-201ENST00000623779 326 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 AC004943.3-201ENST00000624116 600 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 BDP1P-201ENST00000582658 1990 ntBASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
KRT28Q7Z3Y7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AC087359.1-201ENST00000508335 1740 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 RNA5SP374-201ENST00000362939 125 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-931P-201ENST00000363850 107 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 RNU6-621P-201ENST00000364752 109 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 Y_RNA.510-201ENST00000384511 114 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 TIMM9P2-201ENST00000419324 266 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AL022400.1-201ENST00000423946 935 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 IFNNP1-201ENST00000429219 553 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AC087650.1-201ENST00000431445 468 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 RPS25P9-201ENST00000435591 252 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 YWHAZP8-201ENST00000436935 731 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AL445567.1-201ENST00000439121 144 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 MTND6P18-201ENST00000439477 513 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 MTCYBP3-201ENST00000445588 1137 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AL671855.1-201ENST00000446875 1203 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 RSL24D1P3-201ENST00000449255 495 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AC010655.1-201ENST00000449336 292 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 SYPL1P1-201ENST00000473622 768 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 RN7SL504P-201ENST00000494496 287 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AC093281.2-201ENST00000510153 597 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 OR5AK1P-201ENST00000524837 922 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AL121766.1-201ENST00000547436 487 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 EIF5A2P1-201ENST00000564027 460 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 MIR4325-201ENST00000583049 90 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AL606834.2-201ENST00000602954 668 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AC080013.6-201ENST00000606185 215 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AL136981.2-201ENST00000617319 734 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 MIR7154-201ENST00000620673 73 ntBASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT28Q7Z3Y7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms