Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL139099.1-201ENST00000497398 403 ntBASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 WBP1LP3-201ENST00000523033 208 ntBASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 AC068446.3-201ENST00000555285 382 ntBASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 RAC1P9-201ENST00000604990 392 ntBASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 AC027088.4-201ENST00000611559 1947 ntBASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 PABPC1P7-201ENST00000413177 1513 ntBASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LYSMD3Q7Z3D4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC009313.2-201ENST00000417893 1941 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 RN7SKP128-201ENST00000364270 303 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 SNORD70.1-201ENST00000391007 85 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 RNU6-387P-201ENST00000411331 105 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AP000275.1-201ENST00000411943 390 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AL354868.1-201ENST00000417077 482 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 NOTCH2P1-201ENST00000443481 624 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC092647.2-201ENST00000452998 253 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 HLA-DPA3-207ENST00000454398 229 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 SETP20-201ENST00000457046 852 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC245028.2-201ENST00000458673 253 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 ACA64.1-201ENST00000459171 127 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC117503.1-201ENST00000472241 394 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC011005.2-201ENST00000487324 359 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 RN7SL284P-201ENST00000498823 275 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC093767.1-201ENST00000504523 156 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC108078.2-201ENST00000510750 236 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC114781.3-201ENST00000512083 142 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 RNU6-570P-201ENST00000517051 105 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC084783.1-201ENST00000565846 910 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC130289.1-201ENST00000577321 73 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC012443.1-201ENST00000605605 231 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AL138825.1-201ENST00000618587 192 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC109446.4-201ENST00000623235 2755 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 AC103710.2-202ENST00000641454 2853 ntBASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
LYSMD3Q7Z3D4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 AL161756.3-201ENST00000641216 2071 ntBASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 Y_RNA.19-201ENST00000362462 99 ntBASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LYSMD3Q7Z3D4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms