Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-583P-201ENST00000516012 92 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC023538.1-201ENST00000534576 736 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC091516.1-201ENST00000549191 703 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 EEF1B2P4-201ENST00000551398 348 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 MIR4637-201ENST00000582405 84 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 BNIP3P24-201ENST00000593398 557 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 VN1R78P-201ENST00000597393 564 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 VN1R82P-201ENST00000601481 356 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AL139395.1-201ENST00000603662 160 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AL592221.1-201ENST00000605266 382 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 CYP3A51P-201ENST00000633513 256 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 OR5BE1P-202ENST00000641168 1176 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 AP002001.2-201ENST00000529025 1469 ntBASIC3.73□□□□□ -1.81
NUP54Q7Z3B4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 SPRR2C-201ENST00000290702 219 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 RNU1-13P-201ENST00000384499 162 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 RNU6-757P-201ENST00000410334 100 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 RPL21P32-201ENST00000419877 477 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC010099.3-201ENST00000423896 409 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC011742.1-201ENST00000431448 434 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 RPL26P28-201ENST00000451325 435 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 SSXP4-201ENST00000451349 245 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 RPS15AP17-201ENST00000470598 390 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC012181.1-201ENST00000479895 423 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AL132838.2-201ENST00000492041 314 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC021146.8-201ENST00000507455 733 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC021146.1-201ENST00000511202 716 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 OR5AK1P-201ENST00000524837 922 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 HSPE1P3-201ENST00000559254 309 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC087481.2-201ENST00000565492 330 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AL512347.1-201ENST00000566420 503 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC022968.1-201ENST00000567372 442 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 LARP7P2-201ENST00000575306 125 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC243773.3-201ENST00000613270 256 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC008147.4-201ENST00000617570 1204 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 ZYXP1-201ENST00000617638 118 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 AC040168.1-201ENST00000623594 991 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 RNA5SP196-201ENST00000625967 102 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 U6.101-201ENST00000637707 76 ntBASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NUP54Q7Z3B4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
NUP54Q7Z3B4 RLIMP1-201ENST00000339626 1680 ntBASIC3.71□□□□□ -1.81
NUP54Q7Z3B4 MTCO1P23-201ENST00000415223 1526 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC005183.1-201ENST00000603687 1979 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 RNU6-1214P-201ENST00000363650 109 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 MTND4P13-201ENST00000402078 1023 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 MIR1251-201ENST00000408552 70 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 RNA5SP306-201ENST00000411087 107 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 OR1AA1P-201ENST00000419597 916 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 ARF4P2-201ENST00000430209 526 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 OR4C10P-201ENST00000434991 931 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 MTND4P6-201ENST00000438297 472 ntBASIC3.71□□□□□ -1.82
NUP54Q7Z3B4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms