Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AP000916.1-201ENST00000533869 835 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC023161.2-201ENST00000551218 780 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC011611.1-201ENST00000552179 197 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 NCAPGP2-201ENST00000557911 754 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC074051.3-201ENST00000570238 358 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 AL031985.2-201ENST00000600955 480 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC245100.7-201ENST00000609678 442 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC068722.2-201ENST00000618734 544 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC091046.2-201ENST00000620775 665 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
SCXQ7RTU7 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC117529.2-201ENST00000512159 2068 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SCXQ7RTU7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SCXQ7RTU7 AC032011.1-201ENST00000611703 1549 ntBASIC2.27□□□□□ -2.05
SCXQ7RTU7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 AL136520.1-201ENST00000600311 1322 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCXQ7RTU7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCXQ7RTU7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SCXQ7RTU7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCXQ7RTU7 OR5H2-201ENST00000355273 945 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 RNU4-35P-201ENST00000362588 141 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 RNU1-33P-201ENST00000364249 162 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 CD24P4-201ENST00000382840 243 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 MIR649-201ENST00000384843 97 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 RPS3AP26-201ENST00000398259 784 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCXQ7RTU7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 RNU6-55P-201ENST00000411092 107 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 RNU6-954P-201ENST00000411355 107 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 OR51A3P-201ENST00000413596 924 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 SSXP9-201ENST00000417503 292 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 DBIP2-201ENST00000419076 262 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 ATP5JP1-201ENST00000431631 322 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 SNRPEP4-201ENST00000435815 279 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC002542.1-201ENST00000440683 193 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC004022.1-201ENST00000447766 1066 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SCXQ7RTU7 RPL26P28-201ENST00000451325 435 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC104073.1-201ENST00000451988 151 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 MTND2P30-201ENST00000456663 382 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 BX510359.1-201ENST00000456973 237 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC010401.1-201ENST00000463867 348 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC008155.2-201ENST00000464337 397 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 RPS4XP10-201ENST00000465034 731 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC025518.1-201ENST00000479856 347 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 SETP14-201ENST00000497538 873 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 DSTNP2-201ENST00000504533 515 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 SNORA31.1-201ENST00000515993 133 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 RNU6-1102P-201ENST00000516149 96 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 SNORA31.5-201ENST00000516190 133 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 ERHP1-201ENST00000523006 310 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC090666.1-201ENST00000578241 445 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC011492.1-201ENST00000600023 315 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AP001330.4-201ENST00000604350 154 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 VN1R9P-201ENST00000614184 867 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AL355810.1-201ENST00000614629 552 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SCXQ7RTU7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 U4.6-201ENST00000621618 127 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 AL732618.1-201ENST00000623251 301 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AP003355.3-201ENST00000623465 114 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 MTND2P41-201ENST00000637599 773 ntBASIC2.26□□□□□ -2.05
SCXQ7RTU7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SCXQ7RTU7 SGO1P2-201ENST00000429458 1589 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms