Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHFQ7M4L6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHFQ7M4L6 OR5P1P-201ENST00000299512 925 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 SNORA11F-201ENST00000408237 128 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 MIR1179-201ENST00000408703 91 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 USP9YP14-201ENST00000430663 563 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC011998.1-201ENST00000433403 117 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 RPL12P3-201ENST00000440080 396 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 ATP5C1P1-201ENST00000441945 895 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC239367.2-201ENST00000447309 705 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 AP000542.1-201ENST00000448473 371 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 SSXP1-201ENST00000453640 473 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC018638.3-201ENST00000461273 132 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 ARL2BPP4-201ENST00000506854 471 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AF131216.2-201ENST00000512316 564 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AL009028.1-201ENST00000604895 802 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 FAM25E-202ENST00000608562 189 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 AC104010.1-201ENST00000616889 150 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 uc_338.13-201ENST00000618243 179 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 AL590240.3-201ENST00000621416 943 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.8□□□□□ -1.8
SHFQ7M4L6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHFQ7M4L6 ZNF734P-201ENST00000419494 1534 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 AL049555.1-201ENST00000562834 1933 ntBASIC3.8□□□□□ -1.8
SHFQ7M4L6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHFQ7M4L6 MTND4P5-201ENST00000435821 1374 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHFQ7M4L6 PNPT1P2-201ENST00000456768 2050 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHFQ7M4L6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 MIR331-201ENST00000362302 94 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 SNORA37-201ENST00000384504 129 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 RNU6-878P-201ENST00000384578 110 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 MIR550A3-201ENST00000390735 95 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 MTND4LP20-201ENST00000402379 270 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 MIR1183-201ENST00000408856 89 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 RNU2-16P-201ENST00000410712 136 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AL031779.1-201ENST00000415663 330 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 MTATP6P27-201ENST00000416987 621 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC069213.2-201ENST00000420238 366 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AL513174.1-201ENST00000423182 629 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AL356583.2-201ENST00000426536 280 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AL360081.1-201ENST00000428299 555 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 PSMA2P3-201ENST00000429685 675 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 MTCYBP45-201ENST00000435243 565 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AL031667.1-201ENST00000440222 725 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AL512326.1-201ENST00000443050 721 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 ARL2BPP10-201ENST00000446487 531 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHFQ7M4L6 RAD23BP3-201ENST00000454157 1152 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 SUMO2P2-201ENST00000456482 255 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 TPT1P7-201ENST00000458300 517 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC087312.1-201ENST00000471411 480 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 BNIP3P41-201ENST00000503774 571 ntBASIC3.79□□□□□ -1.8
SHFQ7M4L6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.79□□□□□ -1.8
SHFQ7M4L6 AC093853.1-201ENST00000515689 483 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms