Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 AP002799.1-201ENST00000623552 423 ntBASIC5.59□□□□□ -1.51
RNF43Q68DV7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF43Q68DV7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RNF43Q68DV7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF43Q68DV7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF43Q68DV7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RNF43Q68DV7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
RNF43Q68DV7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.59□□□□□ -1.52
RNF43Q68DV7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.59□□□□□ -1.52
RNF43Q68DV7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.52
RNF43Q68DV7 AL078621.3-201ENST00000623707 2042 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 RNU6-522P-201ENST00000364497 107 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 RNU4-66P-201ENST00000365199 138 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 Y_RNA.414-201ENST00000384011 101 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 RNU6-38P-201ENST00000384085 107 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 RPL7P10-201ENST00000417407 739 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 AC108075.1-201ENST00000424692 529 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 AC006548.1-201ENST00000427470 102 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 RPL23AP4-201ENST00000427757 463 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 RPL7AP49-201ENST00000429522 581 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 AL591438.1-201ENST00000433508 581 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 CEACAMP9-201ENST00000442990 513 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 GAPDHP25-201ENST00000447061 1001 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 RNU6-333P-201ENST00000459117 107 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 TMEM251P1-201ENST00000503717 318 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 SUMO2P4-201ENST00000504193 276 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 AC091912.1-201ENST00000511351 248 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 RN7SKP24-201ENST00000515888 284 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 SNORA25.10-201ENST00000515926 124 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 FTH1P11-201ENST00000517577 551 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 AC090751.1-201ENST00000566966 267 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 MIR4480-201ENST00000582492 71 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 AC007485.1-201ENST00000616755 206 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 AC007546.1-201ENST00000619452 559 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 AC078938.1-201ENST00000620993 318 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 CR381572.1-201ENST00000625098 102 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 AC025125.1-201ENST00000624743 1922 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 GVINP1-202ENST00000531871 7271 ntBASIC5.58□□□□□ -1.52
RNF43Q68DV7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF43Q68DV7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RNF43Q68DV7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AP001284.1-201ENST00000528393 2118 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC119744.1-201ENST00000454746 1715 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF43Q68DV7 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 RNU6-1062P-201ENST00000383908 107 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 RNU1-106P-201ENST00000384382 164 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 MIR320B1-201ENST00000390209 79 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 SNORA48.4-201ENST00000391089 134 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 AL109941.1-201ENST00000401925 229 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 AL133388.1-201ENST00000404509 287 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 AL034374.1-201ENST00000406329 351 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 RPL31P52-201ENST00000407532 367 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 RNA5SP487-201ENST00000410186 122 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 RPL34P6-201ENST00000432390 345 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC090804.1-201ENST00000448870 490 ntBASIC5.57□□□□□ -1.52
RNF43Q68DV7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms