Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RNU6-650P-201ENST00000365658 111 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC093422.3-201ENST00000428506 305 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AL513175.1-201ENST00000431492 780 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AL512661.1-201ENST00000434586 1253 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 RPL23AP15-201ENST00000450202 459 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AL035407.2-201ENST00000454090 378 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 RPL21P47-201ENST00000483696 477 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 BNIP3P33-201ENST00000598912 569 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC006539.2-201ENST00000601729 572 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 IGHV3-29-201ENST00000604817 344 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC073569.3-201ENST00000619055 682 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC006213.5-201ENST00000619673 288 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC073592.7-201ENST00000623659 507 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC092608.3-201ENST00000625017 386 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 AC046144.1-201ENST00000478559 1853 ntBASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.17□□□□□ -1.9
PTPN20Q4JDL3 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 RNU6-1339P-201ENST00000363574 91 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 SNORA70.4-201ENST00000365509 134 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 DSTNP4-201ENST00000399472 474 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 RNA5SP274-201ENST00000410484 108 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 RPL36P19-201ENST00000430744 301 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 RPL37P4-201ENST00000448908 268 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 ARPC3P2-201ENST00000457786 533 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 RNA5SP380-201ENST00000517190 98 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 PSMA2P1-201ENST00000526365 646 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 AP000916.1-201ENST00000533869 835 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 MTCYBP28-201ENST00000566728 1132 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 MIR4504-201ENST00000577413 92 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 OR4G1P-201ENST00000588632 938 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 AC007566.2-201ENST00000603642 413 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 RMST_10.1-201ENST00000616309 154 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 AL445493.3-201ENST00000619568 477 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 AC097372.4-201ENST00000625025 466 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
PTPN20Q4JDL3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
PTPN20Q4JDL3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
PTPN20Q4JDL3 AC005183.1-201ENST00000603687 1979 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 ATF1P1-201ENST00000406040 927 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC073264.1-201ENST00000411508 416 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AL606495.1-201ENST00000422100 813 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC127537.2-201ENST00000439258 465 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 ELOCP13-201ENST00000443934 329 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 MTND1P33-201ENST00000446251 917 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AL671855.1-201ENST00000446875 1203 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 DNAJC19P8-201ENST00000452887 259 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC015724.1-201ENST00000478577 156 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 RN7SL633P-201ENST00000488974 297 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 RN7SKP57-201ENST00000517248 293 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 IGKV2D-36-201ENST00000518643 226 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC109635.4-202ENST00000531666 412 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC107954.1-201ENST00000565906 727 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 ATP5F1P7-201ENST00000567330 760 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 MIR5195-201ENST00000583555 115 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AC008687.2-201ENST00000597865 520 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 BNIP3P11-201ENST00000603878 563 ntBASIC3.15□□□□□ -1.91
PTPN20Q4JDL3 AL009028.1-201ENST00000604895 802 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms