Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 ENSAP3-201ENST00000312710 333 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 SNORA11C-201ENST00000408532 129 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 RPL32P35-201ENST00000415214 394 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 OR5H3P-201ENST00000502817 919 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC008628.1-201ENST00000508663 265 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC008565.1-201ENST00000509046 885 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 RNA5SP385-201ENST00000515947 110 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 RNA5SP217-201ENST00000515959 91 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCB1Q12824 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC022080.3-201ENST00000544433 482 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 AL451007.1-201ENST00000595491 289 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC098483.2-201ENST00000603158 454 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 AL392112.1-201ENST00000605115 829 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 VN1R9P-201ENST00000614184 867 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 AC006213.5-201ENST00000619673 288 ntBASIC3.25□□□□□ -1.89
SMARCB1Q12824 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCB1Q12824 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCB1Q12824 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCB1Q12824 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCB1Q12824 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCB1Q12824 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 AL035425.3-201ENST00000564206 4996 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMARCB1Q12824 RNA5SP391-201ENST00000363456 119 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 RNA5SP27-201ENST00000363839 119 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 U3.11-201ENST00000364476 212 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMARCB1Q12824 SNORA54-201ENST00000384281 123 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 RNU6-851P-201ENST00000384565 107 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 MIR607-201ENST00000385241 96 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC110754.1-201ENST00000399740 601 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 HNRNPDP2-201ENST00000406475 478 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 OR4K6P-201ENST00000416478 897 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AL606495.1-201ENST00000422100 813 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 RPL7P46-201ENST00000425129 740 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 UBE2D3P3-201ENST00000426992 425 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC092685.1-201ENST00000447960 1243 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC112492.1-201ENST00000449607 712 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 RPL21P47-201ENST00000483696 477 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 HMGB3P15-201ENST00000507326 574 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 HIGD1AP3-201ENST00000515857 278 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 SYF2P1-201ENST00000550658 413 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 AP000919.1-202ENST00000581139 1264 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 RN7SL622P-201ENST00000585292 275 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AL133393.1-201ENST00000603277 287 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC107294.3-201ENST00000609211 526 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 STMN1P1-201ENST00000617809 440 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC073569.3-201ENST00000619055 682 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.24□□□□□ -1.89
SMARCB1Q12824 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMARCB1Q12824 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.24□□□□□ -1.89
SMARCB1Q12824 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 MIR16-2-201ENST00000362117 81 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 SNORA44-201ENST00000384584 132 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 SNORA40.4-201ENST00000390971 128 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMARCB1Q12824 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 RNA5SP107-201ENST00000411358 122 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 HIGD1AP11-201ENST00000438361 280 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 RPS12P18-201ENST00000442381 270 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 RPL7P59-201ENST00000447700 943 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 RPL29P29-201ENST00000448725 423 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 AC125238.1-201ENST00000448842 249 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 MRPL35P4-201ENST00000453682 566 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 RPL37P3-201ENST00000456825 293 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 AC097462.2-201ENST00000504623 481 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 RN7SKP283-201ENST00000517197 270 ntBASIC3.23□□□□□ -1.89
SMARCB1Q12824 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMARCB1Q12824 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.23□□□□□ -1.89
SMARCB1Q12824 AL136520.1-202ENST00000555494 763 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms