Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 NECAP1P2-201ENST00000455668 727 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AP001992.1-205ENST00000462248 379 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC5Q00444 AC126121.1-201ENST00000482313 553 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 RNU6-1073P-201ENST00000517182 106 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 RNU6-889P-201ENST00000517189 103 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AL133271.1-201ENST00000538229 291 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 HPRT1P3-201ENST00000539521 576 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AC107016.2-201ENST00000547968 190 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC5Q00444 MIR4474-201ENST00000579189 78 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC5Q00444 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC5Q00444 SUMO2P14-201ENST00000604488 293 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 AC096577.2-201ENST00000611455 153 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 AL162274.2-201ENST00000614406 332 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 AC010338.1-201ENST00000621823 717 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 AC006111.3-201ENST00000622137 383 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC5Q00444 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC5Q00444 AC000403.1-201ENST00000613696 3585 ntBASIC2.59□□□□□ -1.99
HOXC5Q00444 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.59□□□□□ -2
HOXC5Q00444 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.59□□□□□ -2
HOXC5Q00444 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXC5Q00444 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.58□□□□□ -2
HOXC5Q00444 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.58□□□□□ -2
HOXC5Q00444 AL024507.1-201ENST00000412741 274 ntBASIC2.58□□□□□ -2
HOXC5Q00444 AL592148.1-201ENST00000413568 445 ntBASIC2.58□□□□□ -2
HOXC5Q00444 RPL35AP12-201ENST00000425362 338 ntBASIC2.58□□□□□ -2
HOXC5Q00444 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.58□□□□□ -2
HOXC5Q00444 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.58□□□□□ -2
HOXC5Q00444 NF1P3-201ENST00000457709 450 ntBASIC2.58□□□□□ -2
HOXC5Q00444 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.58□□□□□ -2
HOXC5Q00444 AC010374.2-201ENST00000512933 535 ntBASIC2.58□□□□□ -2
HOXC5Q00444 SNORA31.13-201ENST00000516624 135 ntBASIC2.58□□□□□ -2
HOXC5Q00444 SCARNA13-201ENST00000516672 275 ntBASIC2.58□□□□□ -2
HOXC5Q00444 RN7SKP57-201ENST00000517248 293 ntBASIC2.58□□□□□ -2
HOXC5Q00444 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.58□□□□□ -2
HOXC5Q00444 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.58□□□□□ -2
HOXC5Q00444 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.58□□□□□ -2
HOXC5Q00444 AC074029.1-201ENST00000552531 1044 ntBASIC2.58□□□□□ -2
HOXC5Q00444 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HOXC5Q00444 H3F3AP1-201ENST00000559984 334 ntBASIC2.58□□□□□ -2
HOXC5Q00444 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.58□□□□□ -2
HOXC5Q00444 MTCO3P24-201ENST00000572729 782 ntBASIC2.58□□□□□ -2
HOXC5Q00444 AC006504.3-201ENST00000586818 523 ntBASIC2.58□□□□□ -2
HOXC5Q00444 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HOXC5Q00444 AC002076.2-201ENST00000617362 122 ntBASIC2.58□□□□□ -2
HOXC5Q00444 Z99129.2-201ENST00000619967 314 ntBASIC2.58□□□□□ -2
HOXC5Q00444 AC024023.1-201ENST00000624530 922 ntBASIC2.58□□□□□ -2
HOXC5Q00444 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
HOXC5Q00444 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
HOXC5Q00444 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.58□□□□□ -2
HOXC5Q00444 AC009487.2-201ENST00000420969 6821 ntBASIC2.58□□□□□ -2
HOXC5Q00444 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HOXC5Q00444 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.57□□□□□ -2
HOXC5Q00444 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.57□□□□□ -2
HOXC5Q00444 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.57□□□□□ -2
HOXC5Q00444 AC016716.1-201ENST00000265882 708 ntBASIC2.57□□□□□ -2
HOXC5Q00444 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
HOXC5Q00444 SNORA18.3-201ENST00000384122 132 ntBASIC2.57□□□□□ -2
HOXC5Q00444 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.57□□□□□ -2
HOXC5Q00444 RPL31P2-201ENST00000413849 377 ntBASIC2.57□□□□□ -2
HOXC5Q00444 LINC01347-201ENST00000417964 355 ntBASIC2.57□□□□□ -2
HOXC5Q00444 RPL21P66-201ENST00000426566 466 ntBASIC2.57□□□□□ -2
HOXC5Q00444 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.57□□□□□ -2
HOXC5Q00444 RPS20P5-201ENST00000434808 360 ntBASIC2.57□□□□□ -2
HOXC5Q00444 AC112653.1-201ENST00000443851 386 ntBASIC2.57□□□□□ -2
HOXC5Q00444 RPL7P52-201ENST00000449200 742 ntBASIC2.57□□□□□ -2
HOXC5Q00444 AC103975.1-201ENST00000482506 483 ntBASIC2.57□□□□□ -2
HOXC5Q00444 AP001025.2-201ENST00000490908 477 ntBASIC2.57□□□□□ -2
HOXC5Q00444 SNORA74D-201ENST00000516404 141 ntBASIC2.57□□□□□ -2
HOXC5Q00444 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.57□□□□□ -2
HOXC5Q00444 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.57□□□□□ -2
HOXC5Q00444 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.57□□□□□ -2
HOXC5Q00444 AF279873.1-201ENST00000523393 313 ntBASIC2.57□□□□□ -2
HOXC5Q00444 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.57□□□□□ -2
HOXC5Q00444 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.57□□□□□ -2
HOXC5Q00444 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.57□□□□□ -2
HOXC5Q00444 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.57□□□□□ -2
HOXC5Q00444 MIR3944-201ENST00000581277 108 ntBASIC2.57□□□□□ -2
HOXC5Q00444 ZNF861P-201ENST00000588126 639 ntBASIC2.57□□□□□ -2
HOXC5Q00444 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.57□□□□□ -2
HOXC5Q00444 AL442067.2-201ENST00000614033 363 ntBASIC2.57□□□□□ -2
HOXC5Q00444 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.57□□□□□ -2
HOXC5Q00444 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
HOXC5Q00444 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.57□□□□□ -2
HOXC5Q00444 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.57□□□□□ -2
HOXC5Q00444 MTCO1P8-201ENST00000416914 1523 ntBASIC2.57□□□□□ -2
HOXC5Q00444 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.57□□□□□ -2
HOXC5Q00444 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
HOXC5Q00444 NSRP1P1-201ENST00000444067 1693 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms