Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HSPG2P98160 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HSPG2P98160 SKINT1L-201ENST00000401057 817 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 ELOCP13-201ENST00000443934 329 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.5□□□□□ -2.17
HSPG2P98160 MIR449C-201ENST00000516047 92 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.5□□□□□ -2.17
HSPG2P98160 FAM60DP-201ENST00000524174 632 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 AC074029.1-201ENST00000552531 1044 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.5□□□□□ -2.17
HSPG2P98160 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.5□□□□□ -2.17
HSPG2P98160 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.5□□□□□ -2.17
HSPG2P98160 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC1.5□□□□□ -2.17
HSPG2P98160 CR589904.2-201ENST00000612533 440 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
HSPG2P98160 AC069528.2-201ENST00000624849 1991 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
HSPG2P98160 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
HSPG2P98160 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HSPG2P98160 EI24P2-201ENST00000397776 1076 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 AL590084.1-201ENST00000407885 387 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.5□□□□□ -2.17
HSPG2P98160 AC107081.1-201ENST00000414975 361 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.5□□□□□ -2.17
HSPG2P98160 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.5□□□□□ -2.17
HSPG2P98160 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.5□□□□□ -2.17
HSPG2P98160 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HSPG2P98160 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HSPG2P98160 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HSPG2P98160 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.5□□□□□ -2.17
HSPG2P98160 PPIAP17-201ENST00000438507 471 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.5□□□□□ -2.17
HSPG2P98160 AC107398.1-201ENST00000486904 505 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.5□□□□□ -2.17
HSPG2P98160 AC025881.1-201ENST00000518851 512 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.5□□□□□ -2.17
HSPG2P98160 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.5□□□□□ -2.17
HSPG2P98160 RPS3AP4-201ENST00000555161 764 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 MIR4635-201ENST00000583759 79 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 AL451049.1-201ENST00000608672 497 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.5□□□□□ -2.17
HSPG2P98160 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC1.5□□□□□ -2.17
HSPG2P98160 AL138878.1-201ENST00000405131 347 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 RPS29P11-201ENST00000496507 171 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 OR5H3P-201ENST00000502817 919 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
HSPG2P98160 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.5□□□□□ -2.17
HSPG2P98160 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.5□□□□□ -2.17
HSPG2P98160 AL356266.1-201ENST00000623311 483 ntBASIC1.5□□□□□ -2.17
HSPG2P98160 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
HSPG2P98160 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC1.49□□□□□ -2.17
HSPG2P98160 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HSPG2P98160 AC006960.1-201ENST00000419980 153 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 AL024509.2-201ENST00000493462 493 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
HSPG2P98160 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.49□□□□□ -2.17
HSPG2P98160 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC1.49□□□□□ -2.17
HSPG2P98160 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.49□□□□□ -2.17
HSPG2P98160 AC090115.4-201ENST00000609970 188 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.49□□□□□ -2.17
HSPG2P98160 AC110994.2-201ENST00000635481 492 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
HSPG2P98160 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HSPG2P98160 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.49□□□□□ -2.17
HSPG2P98160 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC1.49□□□□□ -2.17
HSPG2P98160 CUL1P1-201ENST00000509510 2425 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
HSPG2P98160 RHEBP3-201ENST00000411920 351 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.49□□□□□ -2.17
HSPG2P98160 AL353705.4-201ENST00000449661 238 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 AC021146.5-201ENST00000503544 545 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.49□□□□□ -2.17
HSPG2P98160 AP000857.1-201ENST00000532151 543 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.49□□□□□ -2.17
HSPG2P98160 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.49□□□□□ -2.17
HSPG2P98160 AC092628.2-201ENST00000622492 339 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 AC012078.1-201ENST00000405035 1646 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.49□□□□□ -2.17
HSPG2P98160 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
HSPG2P98160 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HSPG2P98160 RPL9P7-201ENST00000330965 580 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 PTP4A1P7-201ENST00000423476 514 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.49□□□□□ -2.17
HSPG2P98160 ST13P20-201ENST00000447996 1065 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
HSPG2P98160 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.49□□□□□ -2.17
HSPG2P98160 RNA5SP76-201ENST00000516277 87 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.49□□□□□ -2.17
HSPG2P98160 NDUFA5P6-201ENST00000542110 379 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 OOSP1P2-201ENST00000579644 351 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 AL109809.4-201ENST00000603520 2185 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 AC010338.1-201ENST00000621823 717 ntBASIC1.49□□□□□ -2.17
HSPG2P98160 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
HSPG2P98160 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
HSPG2P98160 WWP1P1-201ENST00000466609 2769 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.48□□□□□ -2.17
HSPG2P98160 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.48□□□□□ -2.17
HSPG2P98160 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
HSPG2P98160 TRBV26-201ENST00000456572 344 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms