Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 S100A11P1-201ENST00000477525 312 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AC013356.1-201ENST00000489027 564 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 DSTNP2-201ENST00000504533 515 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CL1P78423 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CL1P78423 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.44□□□□□ -1.86
CX3CL1P78423 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CL1P78423 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.44□□□□□ -1.86
CX3CL1P78423 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CL1P78423 PHBP17-201ENST00000528576 541 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AC068831.4-201ENST00000556118 109 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AP005136.1-201ENST00000579765 429 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 SNRPGP15-201ENST00000600149 222 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AP000403.1-201ENST00000603349 851 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AC112187.2-201ENST00000604345 283 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AC128687.1-201ENST00000605304 619 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AC092653.1-201ENST00000608509 531 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 AC019278.1-201ENST00000623516 479 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.44□□□□□ -1.86
CX3CL1P78423 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CX3CL1P78423 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CX3CL1P78423 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.44□□□□□ -1.86
CX3CL1P78423 AL513185.3-201ENST00000433335 1300 ntBASIC3.44□□□□□ -1.86
CX3CL1P78423 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CX3CL1P78423 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CX3CL1P78423 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.43□□□□□ -1.86
CX3CL1P78423 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CX3CL1P78423 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CX3CL1P78423 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
CX3CL1P78423 RNA5SP388-201ENST00000362584 119 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 RNU6-853P-201ENST00000364306 107 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CX3CL1P78423 RNU6-1207P-201ENST00000384343 107 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 U8.14-201ENST00000390843 143 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 SNORD66.1-201ENST00000391230 76 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AL356421.1-201ENST00000403255 413 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 ELOCP19-201ENST00000411919 318 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.43□□□□□ -1.86
CX3CL1P78423 RPS27AP14-201ENST00000422868 454 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 MTND4LP10-201ENST00000435146 291 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 CDC27P1-201ENST00000445384 715 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.43□□□□□ -1.86
CX3CL1P78423 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AC073387.1-201ENST00000453261 709 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 Z82190.1-201ENST00000454534 490 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 RPS20P32-201ENST00000456044 356 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AP000873.1-201ENST00000463987 400 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 RN7SL459P-201ENST00000481078 302 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AC060788.1-201ENST00000521318 469 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AP004371.1-201ENST00000525240 214 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 HIGD1AP10-201ENST00000527837 282 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AC084824.1-201ENST00000550917 1005 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AC126177.3-201ENST00000551839 688 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.43□□□□□ -1.86
CX3CL1P78423 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.43□□□□□ -1.86
CX3CL1P78423 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AL031985.2-201ENST00000600955 480 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AC068790.4-201ENST00000602474 263 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 XIAPP1-201ENST00000603162 600 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AL356218.2-201ENST00000605264 187 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AC080013.6-201ENST00000606185 215 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 MIR432-201ENST00000606207 94 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AL391497.1-201ENST00000608671 547 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AL359715.5-201ENST00000623431 443 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CX3CL1P78423 AC140479.6-201ENST00000633535 357 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AP003399.1-201ENST00000637534 361 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 CRYM-AS1-204ENST00000637983 556 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CX3CL1P78423 PNPT1P2-201ENST00000456768 2050 ntBASIC3.43□□□□□ -1.86
CX3CL1P78423 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CX3CL1P78423 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms