Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
YBX1P67809 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5□□□□□ -1.61
YBX1P67809 AC009229.4-201ENST00000623854 1947 ntBASIC4.99□□□□□ -1.61
YBX1P67809 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.99□□□□□ -1.61
YBX1P67809 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 AC022031.1-201ENST00000585985 2593 ntBASIC4.99□□□□□ -1.61
YBX1P67809 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
YBX1P67809 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 Y_RNA.100-201ENST00000363141 102 ntBASIC4.99□□□□□ -1.61
YBX1P67809 RNA5SP507-201ENST00000363603 121 ntBASIC4.99□□□□□ -1.61
YBX1P67809 Y_RNA.373-201ENST00000365600 103 ntBASIC4.99□□□□□ -1.61
YBX1P67809 RNU6-606P-201ENST00000384721 111 ntBASIC4.99□□□□□ -1.61
YBX1P67809 ARF4P3-201ENST00000397387 509 ntBASIC4.99□□□□□ -1.61
YBX1P67809 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 AL078604.1-201ENST00000404609 466 ntBASIC4.99□□□□□ -1.61
YBX1P67809 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 RPL23AP27-201ENST00000415161 451 ntBASIC4.99□□□□□ -1.61
YBX1P67809 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.99□□□□□ -1.61
YBX1P67809 AL358176.2-201ENST00000425769 204 ntBASIC4.99□□□□□ -1.61
YBX1P67809 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.99□□□□□ -1.61
YBX1P67809 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.99□□□□□ -1.61
YBX1P67809 RPL23AP74-201ENST00000437246 471 ntBASIC4.99□□□□□ -1.61
YBX1P67809 RPS29P10-201ENST00000439197 166 ntBASIC4.99□□□□□ -1.61
YBX1P67809 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.99□□□□□ -1.61
YBX1P67809 AL049734.2-201ENST00000441066 616 ntBASIC4.99□□□□□ -1.61
YBX1P67809 AC073415.1-201ENST00000449240 153 ntBASIC4.99□□□□□ -1.61
YBX1P67809 Y_RNA.635-201ENST00000459041 101 ntBASIC4.99□□□□□ -1.61
YBX1P67809 VN1R17P-201ENST00000472048 1090 ntBASIC4.99□□□□□ -1.61
YBX1P67809 RPL7AP10-201ENST00000481016 791 ntBASIC4.99□□□□□ -1.61
YBX1P67809 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.99□□□□□ -1.61
YBX1P67809 HMGB3P15-201ENST00000507326 574 ntBASIC4.99□□□□□ -1.61
YBX1P67809 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.99□□□□□ -1.61
YBX1P67809 Y_RNA.720-201ENST00000517166 92 ntBASIC4.99□□□□□ -1.61
YBX1P67809 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.99□□□□□ -1.61
YBX1P67809 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.99□□□□□ -1.61
YBX1P67809 AC024940.3-201ENST00000538551 316 ntBASIC4.99□□□□□ -1.61
YBX1P67809 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.99□□□□□ -1.61
YBX1P67809 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.99□□□□□ -1.61
YBX1P67809 AC068831.4-201ENST00000556118 109 ntBASIC4.99□□□□□ -1.61
YBX1P67809 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.99□□□□□ -1.61
YBX1P67809 AP001029.3-201ENST00000588063 596 ntBASIC4.99□□□□□ -1.61
YBX1P67809 RNU6-89P-201ENST00000606519 100 ntBASIC4.99□□□□□ -1.61
YBX1P67809 RPSAP73-201ENST00000614820 330 ntBASIC4.99□□□□□ -1.61
YBX1P67809 AC079597.1-201ENST00000624306 508 ntBASIC4.99□□□□□ -1.61
YBX1P67809 AC119674.1-207ENST00000641355 633 ntBASIC4.99□□□□□ -1.61
YBX1P67809 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.99□□□□□ -1.61
YBX1P67809 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
YBX1P67809 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
YBX1P67809 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
YBX1P67809 AC009313.2-201ENST00000417893 1941 ntBASIC4.99□□□□□ -1.61
YBX1P67809 AC026951.1-201ENST00000559530 2459 ntBASIC4.99□□□□□ -1.61
YBX1P67809 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.99□□□□□ -1.61
YBX1P67809 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
YBX1P67809 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.98□□□□□ -1.61
YBX1P67809 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
YBX1P67809 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
YBX1P67809 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
YBX1P67809 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
YBX1P67809 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.98□□□□□ -1.61
YBX1P67809 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 Y_RNA.31-201ENST00000362574 102 ntBASIC4.98□□□□□ -1.61
YBX1P67809 SNORA17.1-201ENST00000362945 126 ntBASIC4.98□□□□□ -1.61
YBX1P67809 RNU6-331P-201ENST00000384724 107 ntBASIC4.98□□□□□ -1.61
YBX1P67809 RNY4P36-201ENST00000391116 96 ntBASIC4.98□□□□□ -1.61
YBX1P67809 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.98□□□□□ -1.61
YBX1P67809 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.98□□□□□ -1.61
YBX1P67809 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.98□□□□□ -1.61
YBX1P67809 BX323845.1-201ENST00000432417 179 ntBASIC4.98□□□□□ -1.61
YBX1P67809 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 AC092013.1-201ENST00000438795 332 ntBASIC4.98□□□□□ -1.61
YBX1P67809 RPL12P3-201ENST00000440080 396 ntBASIC4.98□□□□□ -1.61
YBX1P67809 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.98□□□□□ -1.61
YBX1P67809 HSPE1P28-201ENST00000443139 211 ntBASIC4.98□□□□□ -1.61
YBX1P67809 BTF3P6-201ENST00000448054 499 ntBASIC4.98□□□□□ -1.61
YBX1P67809 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.98□□□□□ -1.61
YBX1P67809 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.98□□□□□ -1.61
YBX1P67809 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.98□□□□□ -1.61
YBX1P67809 RNU6-1218P-201ENST00000458990 108 ntBASIC4.98□□□□□ -1.61
YBX1P67809 RPS4XP10-201ENST00000465034 731 ntBASIC4.98□□□□□ -1.61
YBX1P67809 GMFBP1-201ENST00000467831 427 ntBASIC4.98□□□□□ -1.61
YBX1P67809 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 AC068587.1-201ENST00000483613 781 ntBASIC4.98□□□□□ -1.61
YBX1P67809 AC004453.1-201ENST00000487895 408 ntBASIC4.98□□□□□ -1.61
YBX1P67809 SNRPCP2-201ENST00000504370 475 ntBASIC4.98□□□□□ -1.61
YBX1P67809 AC114797.1-201ENST00000514003 728 ntBASIC4.98□□□□□ -1.61
YBX1P67809 SOD1P3-201ENST00000518682 454 ntBASIC4.98□□□□□ -1.61
YBX1P67809 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.98□□□□□ -1.61
YBX1P67809 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.98□□□□□ -1.61
YBX1P67809 AC022360.1-201ENST00000521058 340 ntBASIC4.98□□□□□ -1.61
YBX1P67809 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms