Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LMO4P61968 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.3□□□□□ -1.88
LMO4P61968 AC099654.13-201ENST00000639774 207 ntBASIC3.3□□□□□ -1.88
LMO4P61968 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
LMO4P61968 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LMO4P61968 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
LMO4P61968 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.3□□□□□ -1.88
LMO4P61968 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LMO4P61968 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LMO4P61968 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LMO4P61968 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
LMO4P61968 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
LMO4P61968 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC3.29□□□□□ -1.88
LMO4P61968 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LMO4P61968 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LMO4P61968 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LMO4P61968 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.29□□□□□ -1.88
LMO4P61968 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
LMO4P61968 RNA5SP399-201ENST00000364003 117 ntBASIC3.29□□□□□ -1.88
LMO4P61968 RNU6-621P-201ENST00000364752 109 ntBASIC3.29□□□□□ -1.88
LMO4P61968 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
LMO4P61968 SNORA70E-201ENST00000384492 135 ntBASIC3.29□□□□□ -1.88
LMO4P61968 RNA5SP171-201ENST00000391071 115 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AL133264.1-201ENST00000407157 562 ntBASIC3.29□□□□□ -1.88
LMO4P61968 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.29□□□□□ -1.88
LMO4P61968 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.29□□□□□ -1.88
LMO4P61968 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO4P61968 RPL30P16-201ENST00000419341 429 ntBASIC3.29□□□□□ -1.88
LMO4P61968 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.29□□□□□ -1.88
LMO4P61968 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.29□□□□□ -1.88
LMO4P61968 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO4P61968 PDSS1P1-201ENST00000422953 1114 ntBASIC3.29□□□□□ -1.88
LMO4P61968 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.29□□□□□ -1.88
LMO4P61968 OR4F13P-201ENST00000428478 931 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO4P61968 NEK4P1-201ENST00000433383 879 ntBASIC3.29□□□□□ -1.88
LMO4P61968 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC010881.1-201ENST00000433830 235 ntBASIC3.29□□□□□ -1.88
LMO4P61968 RPS25P9-201ENST00000435591 252 ntBASIC3.29□□□□□ -1.88
LMO4P61968 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.29□□□□□ -1.88
LMO4P61968 AC093155.1-201ENST00000440164 826 ntBASIC3.29□□□□□ -1.88
LMO4P61968 RAB11AP1-201ENST00000442978 646 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AL133547.1-201ENST00000448546 220 ntBASIC3.29□□□□□ -1.88
LMO4P61968 COX6CP18-201ENST00000448769 222 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO4P61968 BX276092.4-201ENST00000452056 248 ntBASIC3.29□□□□□ -1.88
LMO4P61968 SNRPGP9-201ENST00000456025 225 ntBASIC3.29□□□□□ -1.88
LMO4P61968 RPL21P71-201ENST00000465598 459 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC091153.1-201ENST00000466297 402 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC072039.1-201ENST00000477611 581 ntBASIC3.29□□□□□ -1.88
LMO4P61968 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
LMO4P61968 RPL21P103-201ENST00000479921 488 ntBASIC3.29□□□□□ -1.88
LMO4P61968 RPL9P33-201ENST00000484311 566 ntBASIC3.29□□□□□ -1.88
LMO4P61968 ACTG1P13-201ENST00000486987 1043 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC104685.1-201ENST00000502445 371 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO4P61968 DYNLL1P6-201ENST00000503440 264 ntBASIC3.29□□□□□ -1.88
LMO4P61968 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LMO4P61968 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.29□□□□□ -1.88
LMO4P61968 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO4P61968 RNU6-405P-201ENST00000516637 110 ntBASIC3.29□□□□□ -1.88
LMO4P61968 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.29□□□□□ -1.88
LMO4P61968 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.29□□□□□ -1.88
LMO4P61968 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.29□□□□□ -1.88
LMO4P61968 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.29□□□□□ -1.88
LMO4P61968 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.29□□□□□ -1.88
LMO4P61968 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO4P61968 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.29□□□□□ -1.88
LMO4P61968 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.29□□□□□ -1.88
LMO4P61968 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LMO4P61968 OR6C7P-201ENST00000547875 934 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.29□□□□□ -1.88
LMO4P61968 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.29□□□□□ -1.88
LMO4P61968 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.29□□□□□ -1.88
LMO4P61968 BNIP3P30-201ENST00000601184 574 ntBASIC3.29□□□□□ -1.88
LMO4P61968 MTCYBP22-201ENST00000603788 447 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC126118.1-201ENST00000607744 628 ntBASIC3.29□□□□□ -1.88
LMO4P61968 CR392039.5-201ENST00000623201 510 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC124312.6-202ENST00000623624 418 ntBASIC3.29□□□□□ -1.88
LMO4P61968 AC112200.1-201ENST00000625015 234 ntBASIC3.29□□□□□ -1.88
LMO4P61968 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.29□□□□□ -1.88
LMO4P61968 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO4P61968 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LMO4P61968 MARK2P15-201ENST00000432204 2186 ntBASIC3.29□□□□□ -1.88
LMO4P61968 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LMO4P61968 MTND5P28-201ENST00000438005 1594 ntBASIC3.29□□□□□ -1.88
LMO4P61968 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO4P61968 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LMO4P61968 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LMO4P61968 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
LMO4P61968 AP002001.2-201ENST00000529025 1469 ntBASIC3.28□□□□□ -1.88
LMO4P61968 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LMO4P61968 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
LMO4P61968 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.28□□□□□ -1.88
LMO4P61968 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LMO4P61968 AL161912.2-201ENST00000565707 3007 ntBASIC3.28□□□□□ -1.88
LMO4P61968 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.28□□□□□ -1.88
LMO4P61968 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LMO4P61968 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms