Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC4P56524 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC4P56524 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.21□□□□□ -1.74
HDAC4P56524 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HDAC4P56524 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC4P56524 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC4P56524 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HDAC4P56524 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.21□□□□□ -1.74
HDAC4P56524 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HDAC4P56524 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.2□□□□□ -1.74
HDAC4P56524 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
HDAC4P56524 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HDAC4P56524 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HDAC4P56524 SNRPEP3-201ENST00000338402 276 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 RPL23AP29-201ENST00000397284 453 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HDAC4P56524 MIR1284-201ENST00000408337 120 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC4P56524 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HDAC4P56524 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.2□□□□□ -1.74
HDAC4P56524 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC4P56524 MTND2P4-201ENST00000445034 1004 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC4P56524 HMGB3P22-202ENST00000451823 572 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AC097262.1-201ENST00000452559 548 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 TRGVB-201ENST00000453257 471 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AC073387.1-201ENST00000453261 709 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 RPL18AP17-201ENST00000455326 198 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 snoU13.22-201ENST00000459428 104 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AC092757.1-201ENST00000467293 467 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.2□□□□□ -1.74
HDAC4P56524 PPIAP15-201ENST00000479662 484 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AP002812.1-201ENST00000495378 474 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 RPL31P61-201ENST00000496160 376 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 MTCYBP37-201ENST00000510642 1133 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 LTV1P1-201ENST00000510683 1237 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC4P56524 AC005798.1-201ENST00000513715 387 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 OR4R3P-201ENST00000525084 838 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.2□□□□□ -1.74
HDAC4P56524 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
HDAC4P56524 AC092470.1-201ENST00000546187 132 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
HDAC4P56524 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.2□□□□□ -1.74
HDAC4P56524 AC034105.4-201ENST00000568304 277 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 MIR4429-201ENST00000580105 73 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AC015726.1-201ENST00000602353 681 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.2□□□□□ -1.74
HDAC4P56524 MIR6868-201ENST00000611215 58 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AC012531.5-201ENST00000611375 151 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AC004223.4-201ENST00000612426 332 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AL136981.2-201ENST00000617319 734 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AC092650.2-201ENST00000619984 902 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 AC091965.5-201ENST00000624785 342 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HDAC4P56524 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HDAC4P56524 AL513185.3-201ENST00000433335 1300 ntBASIC4.2□□□□□ -1.74
HDAC4P56524 MTND5P24-201ENST00000438892 1767 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HDAC4P56524 AL022722.2-201ENST00000402519 180 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 SNORA3C-201ENST00000408792 125 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 RNA5SP317-201ENST00000410176 116 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 RNA5SP311-201ENST00000411290 116 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HDAC4P56524 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC4P56524 OR5BE1P-201ENST00000425977 939 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC4P56524 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC4P56524 ISCA1P2-201ENST00000438679 421 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AC092427.1-201ENST00000439177 601 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.19□□□□□ -1.74
HDAC4P56524 UBE2D3P4-201ENST00000441973 436 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC4P56524 VN1R10P-201ENST00000447106 875 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 RPS11P1-201ENST00000451072 473 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC4P56524 HMGN2P7-201ENST00000456186 273 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 RN7SL271P-201ENST00000487601 295 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 TMEM248P1-201ENST00000510579 951 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC4P56524 RNA5SP315-201ENST00000516340 116 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 RNA5SP312-201ENST00000517068 116 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 MTCO1P49-201ENST00000523429 802 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.19□□□□□ -1.74
HDAC4P56524 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.19□□□□□ -1.74
HDAC4P56524 AC103710.3-201ENST00000608157 948 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AL354976.1-201ENST00000613843 387 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 AC008083.4-201ENST00000615076 444 ntBASIC4.19□□□□□ -1.74
HDAC4P56524 ZYXP1-201ENST00000617638 118 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms