Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.29□□□□□ -1.72
SUMO3P55854 MIR4436B1-201ENST00000583272 91 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.29□□□□□ -1.72
SUMO3P55854 AC107304.1-201ENST00000604229 296 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 AL158211.4-201ENST00000606988 584 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 AC004908.2-201ENST00000609090 574 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 AC090970.3-201ENST00000612566 866 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 AC026368.1-201ENST00000614934 690 ntBASIC4.29□□□□□ -1.72
SUMO3P55854 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.29□□□□□ -1.72
SUMO3P55854 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.29□□□□□ -1.72
SUMO3P55854 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SUMO3P55854 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SUMO3P55854 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SUMO3P55854 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.29□□□□□ -1.72
SUMO3P55854 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.29□□□□□ -1.72
SUMO3P55854 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SUMO3P55854 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SUMO3P55854 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 THAP12P5-201ENST00000405864 2275 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 RNA5SP191-201ENST00000362585 102 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 RNU6-1155P-201ENST00000363554 107 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 MIR19A-201ENST00000384878 82 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 HSPD1P16-201ENST00000402302 394 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 RNU6-195P-201ENST00000411352 109 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 USP9YP36-201ENST00000424581 829 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.28□□□□□ -1.72
SUMO3P55854 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.28□□□□□ -1.72
SUMO3P55854 FTH1P1-201ENST00000437933 532 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 RPS26P2-201ENST00000440331 348 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 AL136380.1-201ENST00000447970 162 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 AC093899.1-201ENST00000457984 376 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 RBM43P1-201ENST00000476891 1081 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 AC093278.1-201ENST00000494700 600 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 AC023424.1-201ENST00000496058 459 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 AC231760.1-201ENST00000498002 260 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 AC010587.1-201ENST00000505809 469 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.28□□□□□ -1.72
SUMO3P55854 AC022483.1-201ENST00000514020 567 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.28□□□□□ -1.72
SUMO3P55854 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 AC126177.3-201ENST00000551839 688 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.28□□□□□ -1.72
SUMO3P55854 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.28□□□□□ -1.72
SUMO3P55854 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 RN7SL652P-201ENST00000577769 300 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 AP001094.1-201ENST00000579805 193 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 COX6CP3-201ENST00000580869 223 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 AC092794.1-201ENST00000612734 582 ntBASIC4.28□□□□□ -1.72
SUMO3P55854 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.28□□□□□ -1.72
SUMO3P55854 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SUMO3P55854 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SUMO3P55854 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SUMO3P55854 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SUMO3P55854 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SUMO3P55854 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.27□□□□□ -1.73
SUMO3P55854 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SUMO3P55854 AL645937.1-201ENST00000641739 1652 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SUMO3P55854 RNU1-83P-201ENST00000363426 164 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 RNU4-1-201ENST00000363925 141 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 Y_RNA.296-201ENST00000364930 108 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SUMO3P55854 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 MIR298-201ENST00000401212 88 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SUMO3P55854 GSTA9P-201ENST00000406231 611 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SUMO3P55854 RNU6-516P-201ENST00000411381 104 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AC127391.1-201ENST00000411737 98 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.27□□□□□ -1.73
SUMO3P55854 MTND3P17-201ENST00000416968 344 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.27□□□□□ -1.73
SUMO3P55854 AC140479.3-201ENST00000418944 1126 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.27□□□□□ -1.73
SUMO3P55854 FABP7P2-201ENST00000429946 379 ntBASIC4.27□□□□□ -1.73
SUMO3P55854 TIMM9P1-201ENST00000436122 256 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms