Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ARL2BPP6-201ENST00000512757 439 ntBASIC3.71□□□□□ -1.82
VCPP55072 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.71□□□□□ -1.82
VCPP55072 RNA5SP341-201ENST00000516261 117 ntBASIC3.71□□□□□ -1.82
VCPP55072 RANP9-201ENST00000519957 271 ntBASIC3.71□□□□□ -1.82
VCPP55072 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.71□□□□□ -1.82
VCPP55072 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.71□□□□□ -1.82
VCPP55072 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.71□□□□□ -1.82
VCPP55072 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.71□□□□□ -1.82
VCPP55072 MTCYBP28-201ENST00000566728 1132 ntBASIC3.71□□□□□ -1.82
VCPP55072 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.71□□□□□ -1.82
VCPP55072 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.71□□□□□ -1.82
VCPP55072 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.71□□□□□ -1.82
VCPP55072 AC007566.2-201ENST00000603642 413 ntBASIC3.71□□□□□ -1.82
VCPP55072 AL033523.1-201ENST00000605153 153 ntBASIC3.71□□□□□ -1.82
VCPP55072 AC013468.1-201ENST00000608680 598 ntBASIC3.71□□□□□ -1.82
VCPP55072 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.71□□□□□ -1.82
VCPP55072 AC013412.1-201ENST00000610687 192 ntBASIC3.71□□□□□ -1.82
VCPP55072 AC022149.2-201ENST00000621061 203 ntBASIC3.71□□□□□ -1.82
VCPP55072 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.71□□□□□ -1.82
VCPP55072 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.71□□□□□ -1.82
VCPP55072 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VCPP55072 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VCPP55072 AL035425.3-201ENST00000564206 4996 ntBASIC3.71□□□□□ -1.82
VCPP55072 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VCPP55072 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VCPP55072 MIR591-201ENST00000385290 95 ntBASIC3.7□□□□□ -1.82
VCPP55072 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
VCPP55072 AL139095.1-201ENST00000404326 391 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC073264.1-201ENST00000411508 416 ntBASIC3.7□□□□□ -1.82
VCPP55072 MTND4P22-201ENST00000413116 1169 ntBASIC3.7□□□□□ -1.82
VCPP55072 TOMM22P1-201ENST00000418578 312 ntBASIC3.7□□□□□ -1.82
VCPP55072 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.7□□□□□ -1.82
VCPP55072 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.7□□□□□ -1.82
VCPP55072 AL158071.1-201ENST00000430315 461 ntBASIC3.7□□□□□ -1.82
VCPP55072 RPL36P19-201ENST00000430744 301 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.7□□□□□ -1.82
VCPP55072 RNF2P1-201ENST00000442955 1010 ntBASIC3.7□□□□□ -1.82
VCPP55072 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.7□□□□□ -1.82
VCPP55072 MRPS31P2-201ENST00000451581 518 ntBASIC3.7□□□□□ -1.82
VCPP55072 RNU7-140P-201ENST00000459546 60 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC092754.2-201ENST00000463506 460 ntBASIC3.7□□□□□ -1.82
VCPP55072 VN1R17P-201ENST00000472048 1090 ntBASIC3.7□□□□□ -1.82
VCPP55072 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.7□□□□□ -1.82
VCPP55072 AC015724.1-201ENST00000478577 156 ntBASIC3.7□□□□□ -1.82
VCPP55072 KC877373.1-201ENST00000479066 408 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC080014.1-201ENST00000496877 1201 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.7□□□□□ -1.82
VCPP55072 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.7□□□□□ -1.82
VCPP55072 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.7□□□□□ -1.82
VCPP55072 IGJP1-201ENST00000522682 475 ntBASIC3.7□□□□□ -1.82
VCPP55072 PDCL2P2-201ENST00000533651 189 ntBASIC3.7□□□□□ -1.82
VCPP55072 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.7□□□□□ -1.82
VCPP55072 AC006518.2-201ENST00000542513 940 ntBASIC3.7□□□□□ -1.82
VCPP55072 SYF2P1-201ENST00000550658 413 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.7□□□□□ -1.82
VCPP55072 AL157394.1-201ENST00000562983 1224 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.7□□□□□ -1.82
VCPP55072 MIR5680-201ENST00000577577 84 ntBASIC3.7□□□□□ -1.82
VCPP55072 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.7□□□□□ -1.82
VCPP55072 MIR4425-201ENST00000580572 84 ntBASIC3.7□□□□□ -1.82
VCPP55072 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
VCPP55072 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.7□□□□□ -1.82
VCPP55072 AC008687.2-201ENST00000597865 520 ntBASIC3.7□□□□□ -1.82
VCPP55072 BNIP3P27-201ENST00000599991 412 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC011492.1-201ENST00000600023 315 ntBASIC3.7□□□□□ -1.82
VCPP55072 BNIP3P38-201ENST00000601117 544 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC091488.1-201ENST00000604239 660 ntBASIC3.7□□□□□ -1.82
VCPP55072 AL365503.1-201ENST00000605247 905 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC099785.1-201ENST00000605697 437 ntBASIC3.7□□□□□ -1.82
VCPP55072 AL512427.1-201ENST00000618593 349 ntBASIC3.7□□□□□ -1.82
VCPP55072 AL590240.3-201ENST00000621416 943 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC007998.5-201ENST00000622938 237 ntBASIC3.7□□□□□ -1.82
VCPP55072 AC126544.2-201ENST00000625174 749 ntBASIC3.7□□□□□ -1.82
VCPP55072 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VCPP55072 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
VCPP55072 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
VCPP55072 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VCPP55072 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VCPP55072 AC021755.1-201ENST00000559747 1447 ntBASIC3.7□□□□□ -1.82
VCPP55072 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
VCPP55072 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
VCPP55072 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VCPP55072 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
VCPP55072 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VCPP55072 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VCPP55072 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.69□□□□□ -1.82
VCPP55072 ELL2P4-201ENST00000446870 1376 ntBASIC3.69□□□□□ -1.82
VCPP55072 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VCPP55072 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.69□□□□□ -1.82
VCPP55072 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.69□□□□□ -1.82
VCPP55072 RNU6-1000P-201ENST00000391066 106 ntBASIC3.69□□□□□ -1.82
VCPP55072 MTCO3P31-201ENST00000405526 789 ntBASIC3.69□□□□□ -1.82
VCPP55072 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.69□□□□□ -1.82
VCPP55072 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.69□□□□□ -1.82
VCPP55072 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.69□□□□□ -1.82
VCPP55072 AL513174.1-201ENST00000423182 629 ntBASIC3.69□□□□□ -1.82
VCPP55072 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.69□□□□□ -1.82
VCPP55072 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.69□□□□□ -1.82
VCPP55072 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.69□□□□□ -1.82
VCPP55072 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms