Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RPL36AP6-201ENST00000435770 321 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 MUPP-201ENST00000438111 566 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 CACYBPP1-201ENST00000438592 684 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 RPL30P9-201ENST00000465586 330 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.37□□□□□ -1.87
CLTCL1P53675 RN7SKP244-201ENST00000516513 307 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.37□□□□□ -1.87
CLTCL1P53675 AP001317.1-201ENST00000531194 960 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 AC099778.2-201ENST00000610904 211 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 AC004696.1-201ENST00000614345 607 ntBASIC3.37□□□□□ -1.87
CLTCL1P53675 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
CLTCL1P53675 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.36□□□□□ -1.87
CLTCL1P53675 Z99496.1-201ENST00000469424 1477 ntBASIC3.36□□□□□ -1.87
CLTCL1P53675 AL133412.1-201ENST00000380194 2992 ntBASIC3.36□□□□□ -1.87
CLTCL1P53675 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLTCL1P53675 SNORD6-201ENST00000365444 73 ntBASIC3.36□□□□□ -1.87
CLTCL1P53675 AL591416.1-201ENST00000404015 867 ntBASIC3.36□□□□□ -1.87
CLTCL1P53675 DPH3P2-201ENST00000422618 250 ntBASIC3.36□□□□□ -1.87
CLTCL1P53675 RPS4XP6-201ENST00000477670 797 ntBASIC3.36□□□□□ -1.87
CLTCL1P53675 AL024509.2-201ENST00000493462 493 ntBASIC3.36□□□□□ -1.87
CLTCL1P53675 MIR6766-201ENST00000622641 72 ntBASIC3.36□□□□□ -1.87
CLTCL1P53675 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLTCL1P53675 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.35□□□□□ -1.87
CLTCL1P53675 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.35□□□□□ -1.87
CLTCL1P53675 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.35□□□□□ -1.87
CLTCL1P53675 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.35□□□□□ -1.87
CLTCL1P53675 AC007536.1-201ENST00000533382 349 ntBASIC3.35□□□□□ -1.87
CLTCL1P53675 MIR5007-201ENST00000583098 95 ntBASIC3.35□□□□□ -1.87
CLTCL1P53675 AC103710.3-201ENST00000608157 948 ntBASIC3.35□□□□□ -1.87
CLTCL1P53675 AC073348.1-201ENST00000623002 331 ntBASIC3.35□□□□□ -1.87
CLTCL1P53675 AC026523.2-201ENST00000625039 7739 ntBASIC3.35□□□□□ -1.87
CLTCL1P53675 AC009501.3-201ENST00000605001 1352 ntBASIC3.35□□□□□ -1.87
CLTCL1P53675 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLTCL1P53675 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CLTCL1P53675 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CLTCL1P53675 SNORD114-1-201ENST00000362705 72 ntBASIC3.34□□□□□ -1.87
CLTCL1P53675 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.34□□□□□ -1.87
CLTCL1P53675 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.34□□□□□ -1.87
CLTCL1P53675 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.34□□□□□ -1.87
CLTCL1P53675 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.34□□□□□ -1.87
CLTCL1P53675 AC112673.1-201ENST00000513168 575 ntBASIC3.34□□□□□ -1.87
CLTCL1P53675 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLTCL1P53675 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.34□□□□□ -1.87
CLTCL1P53675 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CLTCL1P53675 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLTCL1P53675 CUL1P1-201ENST00000509510 2425 ntBASIC3.34□□□□□ -1.87
CLTCL1P53675 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.34□□□□□ -1.87
CLTCL1P53675 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CLTCL1P53675 SNORD21-201ENST00000383953 95 ntBASIC3.33□□□□□ -1.88
CLTCL1P53675 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.33□□□□□ -1.88
CLTCL1P53675 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.33□□□□□ -1.88
CLTCL1P53675 AL591806.2-201ENST00000433122 173 ntBASIC3.33□□□□□ -1.88
CLTCL1P53675 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.33□□□□□ -1.88
CLTCL1P53675 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CLTCL1P53675 RPL23AP49-201ENST00000492925 468 ntBASIC3.33□□□□□ -1.88
CLTCL1P53675 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.33□□□□□ -1.88
CLTCL1P53675 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.33□□□□□ -1.88
CLTCL1P53675 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.33□□□□□ -1.88
CLTCL1P53675 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.33□□□□□ -1.88
CLTCL1P53675 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLTCL1P53675 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLTCL1P53675 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.33□□□□□ -1.88
CLTCL1P53675 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLTCL1P53675 RNU6-482P-201ENST00000391068 107 ntBASIC3.33□□□□□ -1.88
CLTCL1P53675 SAR1AP4-201ENST00000429225 591 ntBASIC3.33□□□□□ -1.88
CLTCL1P53675 GAPDHP39-201ENST00000481866 979 ntBASIC3.33□□□□□ -1.88
CLTCL1P53675 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.33□□□□□ -1.88
CLTCL1P53675 AL354950.1-201ENST00000614150 568 ntBASIC3.33□□□□□ -1.88
CLTCL1P53675 AL160394.1-201ENST00000624765 724 ntBASIC3.33□□□□□ -1.88
CLTCL1P53675 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.33□□□□□ -1.88
CLTCL1P53675 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.33□□□□□ -1.88
CLTCL1P53675 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.33□□□□□ -1.88
CLTCL1P53675 FRG1BP-201ENST00000278882 761 ntBASIC3.32□□□□□ -1.88
CLTCL1P53675 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLTCL1P53675 RPL21P132-201ENST00000331267 462 ntBASIC3.32□□□□□ -1.88
CLTCL1P53675 AC013410.1-201ENST00000436223 1232 ntBASIC3.32□□□□□ -1.88
CLTCL1P53675 AC092436.1-201ENST00000506450 503 ntBASIC3.32□□□□□ -1.88
CLTCL1P53675 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.32□□□□□ -1.88
CLTCL1P53675 SEC11B-201ENST00000518383 499 ntBASIC3.32□□□□□ -1.88
CLTCL1P53675 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.32□□□□□ -1.88
CLTCL1P53675 MTCYBP20-201ENST00000524239 1129 ntBASIC3.32□□□□□ -1.88
CLTCL1P53675 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.32□□□□□ -1.88
CLTCL1P53675 AC104454.1-201ENST00000421341 1401 ntBASIC3.31□□□□□ -1.88
CLTCL1P53675 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.31□□□□□ -1.88
CLTCL1P53675 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.31□□□□□ -1.88
CLTCL1P53675 RPS27P27-201ENST00000498779 255 ntBASIC3.31□□□□□ -1.88
CLTCL1P53675 NDUFB4P9-201ENST00000511646 388 ntBASIC3.31□□□□□ -1.88
CLTCL1P53675 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.31□□□□□ -1.88
CLTCL1P53675 NTAN1P1-201ENST00000603150 646 ntBASIC3.31□□□□□ -1.88
CLTCL1P53675 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLTCL1P53675 AC093010.3-201ENST00000570269 15214 ntBASIC3.31□□□□□ -1.88
CLTCL1P53675 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLTCL1P53675 AC009487.2-201ENST00000420969 6821 ntBASIC3.31□□□□□ -1.88
CLTCL1P53675 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLTCL1P53675 HMGB1P11-201ENST00000413899 637 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.3□□□□□ -1.88
CLTCL1P53675 AP001086.1-201ENST00000494882 321 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 AC106872.3-201ENST00000495104 446 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 AC025281.1-201ENST00000567026 265 ntBASIC3.3□□□□□ -1.88
CLTCL1P53675 AC002076.2-201ENST00000617362 122 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms