Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC027807.1-201ENST00000559921 996 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AL031281.1-201ENST00000604049 488 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AC115621.1-201ENST00000604653 858 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AC005000.2-201ENST00000605468 310 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.23□□□□□ -1.89
HCFC1P51610 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HCFC1P51610 FAM35DP-201ENST00000323387 2712 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.23□□□□□ -1.89
HCFC1P51610 BDP1P-201ENST00000582658 1990 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 AL133412.1-201ENST00000380194 2992 ntBASIC3.23□□□□□ -1.89
HCFC1P51610 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
HCFC1P51610 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
HCFC1P51610 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HCFC1P51610 RNU4-35P-201ENST00000362588 141 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HCFC1P51610 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.22□□□□□ -1.89
HCFC1P51610 RNU6-920P-201ENST00000410926 92 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AL161449.1-201ENST00000414531 1199 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.22□□□□□ -1.89
HCFC1P51610 AL035407.1-201ENST00000429211 571 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.22□□□□□ -1.89
HCFC1P51610 RPS6P12-201ENST00000432491 726 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC129850.1-201ENST00000436203 508 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC092473.1-201ENST00000441098 221 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 MTND3P1-201ENST00000441336 220 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC097493.1-201ENST00000463958 372 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 SYPL1P1-201ENST00000473622 768 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 MTND6P6-201ENST00000478031 263 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 RPS3AP50-201ENST00000487064 803 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC106872.2-201ENST00000494303 480 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.22□□□□□ -1.89
HCFC1P51610 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.22□□□□□ -1.89
HCFC1P51610 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.22□□□□□ -1.89
HCFC1P51610 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC1P51610 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.22□□□□□ -1.89
HCFC1P51610 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC1P51610 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.22□□□□□ -1.89
HCFC1P51610 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC1P51610 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.22□□□□□ -1.89
HCFC1P51610 NBR2-204ENST00000587322 63 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AL022161.1-201ENST00000604390 213 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 AC135507.2-201ENST00000612443 309 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 uc_338.32-201ENST00000615087 172 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC1P51610 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC1P51610 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC1P51610 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC1P51610 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.22□□□□□ -1.89
HCFC1P51610 RN7SKP44-201ENST00000363602 316 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 RNU1-33P-201ENST00000364249 162 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.22□□□□□ -1.89
HCFC1P51610 MIR217-201ENST00000384817 110 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.22□□□□□ -1.89
HCFC1P51610 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.22□□□□□ -1.89
HCFC1P51610 FCF1P2-201ENST00000415284 583 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC234782.4-201ENST00000417646 1048 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 MTCO3P1-205ENST00000422088 832 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC017083.1-201ENST00000428093 483 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC005019.1-201ENST00000436455 431 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 SNORA71B-202ENST00000439232 272 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.22□□□□□ -1.89
HCFC1P51610 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HCFC1P51610 AC010307.1-201ENST00000467206 836 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AL049873.1-201ENST00000480540 376 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC093663.1-201ENST00000497190 394 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.22□□□□□ -1.89
HCFC1P51610 RNA5SP216-201ENST00000516111 123 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC239860.2-201ENST00000525886 270 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.22□□□□□ -1.89
HCFC1P51610 HIGD1AP17-201ENST00000554576 276 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 VN1R82P-201ENST00000601481 356 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC106791.2-201ENST00000604680 391 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AC110741.2-201ENST00000605278 268 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 RNU6-88P-201ENST00000606801 100 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 AP004247.3-201ENST00000608682 624 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC1P51610 AL513185.3-201ENST00000433335 1300 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
HCFC1P51610 SGO1P2-201ENST00000429458 1589 ntBASIC3.22□□□□□ -1.89
HCFC1P51610 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.22□□□□□ -1.89
HCFC1P51610 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.22□□□□□ -1.89
HCFC1P51610 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.22□□□□□ -1.89
HCFC1P51610 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.21□□□□□ -1.89
HCFC1P51610 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.89
HCFC1P51610 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms