Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.16□□□□□ -1.74
PTPN9P43378 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPN9P43378 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPN9P43378 MTND1P30-201ENST00000441241 901 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPN9P43378 OR6C5P-201ENST00000452388 923 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.16□□□□□ -1.74
PTPN9P43378 RNU7-136P-201ENST00000458819 69 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 MEMO1P3-201ENST00000459811 302 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 MTND4LP3-201ENST00000468320 276 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 PABPC1P3-201ENST00000469174 459 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPN9P43378 TMEM251P1-201ENST00000503717 318 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPN9P43378 AC093809.1-201ENST00000509155 340 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.16□□□□□ -1.74
PTPN9P43378 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 MTCYBP43-201ENST00000513621 740 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 AC117532.1-201ENST00000514638 323 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 RN7SKP234-201ENST00000517173 224 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPN9P43378 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.16□□□□□ -1.74
PTPN9P43378 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 AC068587.4-201ENST00000533893 186 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 YPEL5P3-201ENST00000547227 352 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.16□□□□□ -1.74
PTPN9P43378 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.16□□□□□ -1.74
PTPN9P43378 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPN9P43378 MTCYBP22-201ENST00000603788 447 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 AC010680.4-201ENST00000605334 543 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.16□□□□□ -1.74
PTPN9P43378 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.16□□□□□ -1.74
PTPN9P43378 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 AC112484.5-201ENST00000624189 228 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 AC090229.1-201ENST00000590983 1609 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.16□□□□□ -1.74
PTPN9P43378 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PTPN9P43378 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PTPN9P43378 RLIMP1-201ENST00000339626 1680 ntBASIC4.16□□□□□ -1.74
PTPN9P43378 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN9P43378 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN9P43378 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
PTPN9P43378 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN9P43378 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PTPN9P43378 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.15□□□□□ -1.74
PTPN9P43378 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
PTPN9P43378 AL356473.1-201ENST00000406203 1408 ntBASIC4.15□□□□□ -1.74
PTPN9P43378 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
PTPN9P43378 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
PTPN9P43378 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.15□□□□□ -1.74
PTPN9P43378 AL672167.1-206ENST00000356293 943 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 RNU6-374P-201ENST00000364146 108 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 RNU6-730P-201ENST00000383954 104 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 MT-TH-201ENST00000387441 69 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 RPL7AP73-201ENST00000413490 353 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 RSL24D1P6-201ENST00000426934 401 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN9P43378 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN9P43378 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN9P43378 HMGB1P37-201ENST00000439613 609 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 EEF1E1P1-201ENST00000446998 430 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 AC114755.5-201ENST00000447760 831 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN9P43378 MTCO2P18-201ENST00000457151 658 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 ARPC3P2-201ENST00000457786 533 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN9P43378 RPL37P6-202ENST00000464216 403 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PTPN9P43378 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN9P43378 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN9P43378 AC006499.5-201ENST00000505037 514 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN9P43378 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN9P43378 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN9P43378 AC002456.2-201ENST00000509356 380 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN9P43378 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN9P43378 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN9P43378 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.15□□□□□ -1.75
PTPN9P43378 HIGD1AP10-201ENST00000527837 282 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN9P43378 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN9P43378 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN9P43378 AC012435.1-202ENST00000568772 240 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN9P43378 MIR4458-201ENST00000578872 75 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.15□□□□□ -1.75
PTPN9P43378 AP001004.1-201ENST00000582468 324 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 AC008507.1-201ENST00000587506 734 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.15□□□□□ -1.75
PTPN9P43378 AL022161.1-201ENST00000604390 213 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.15□□□□□ -1.75
PTPN9P43378 AC105429.2-201ENST00000610567 517 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 AC084782.3-201ENST00000612282 578 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 AL357080.1-201ENST00000617394 239 ntBASIC4.15□□□□□ -1.75
PTPN9P43378 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
PTPN9P43378 AP006248.2-201ENST00000623309 592 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms