Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MTND1P33-201ENST00000446251 917 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 AC112492.1-201ENST00000449607 712 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 RPL23AP14-201ENST00000468281 468 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 RN7SL633P-201ENST00000488974 297 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 AC093278.1-201ENST00000494700 600 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 NIPA2P2-201ENST00000496376 1083 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 AC097462.2-201ENST00000504623 481 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 AC114967.1-201ENST00000504890 259 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFSF9P41273 AC133963.2-201ENST00000513686 578 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 IGKV2D-36-201ENST00000518643 226 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.19□□□□□ -1.9
TNFSF9P41273 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
TNFSF9P41273 AC006504.3-201ENST00000586818 523 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFSF9P41273 AC040174.2-201ENST00000602701 465 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 OR4H6P-202ENST00000603819 340 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 U6.98-201ENST00000637157 84 ntBASIC3.19□□□□□ -1.9
TNFSF9P41273 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TNFSF9P41273 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TNFSF9P41273 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TNFSF9P41273 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF9P41273 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFSF9P41273 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF9P41273 AC000367.1-201ENST00000452711 1766 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFSF9P41273 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF9P41273 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF9P41273 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFSF9P41273 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.18□□□□□ -1.9
TNFSF9P41273 AL159169.1-201ENST00000421119 127 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFSF9P41273 TXNP1-201ENST00000441872 371 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFSF9P41273 AL162389.1-201ENST00000449233 177 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 RPS4XP13-201ENST00000483219 789 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 AC021146.5-201ENST00000503544 545 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFSF9P41273 RPL23AP94-201ENST00000512518 302 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 SCGB1D5P-201ENST00000515134 247 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFSF9P41273 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFSF9P41273 AC107954.1-201ENST00000565906 727 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFSF9P41273 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFSF9P41273 AC011492.1-201ENST00000600023 315 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 MIR7106-201ENST00000612419 65 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 AC020658.4-201ENST00000613987 684 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 FRG1HP-204ENST00000617940 757 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TNFSF9P41273 AC005858.4-201ENST00000623191 700 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 MIR7153-201ENST00000637758 57 ntBASIC3.18□□□□□ -1.9
TNFSF9P41273 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TNFSF9P41273 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF9P41273 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF9P41273 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TNFSF9P41273 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF9P41273 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TNFSF9P41273 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFSF9P41273 AP003122.5-201ENST00000527668 3766 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 ZNF37BP-203ENST00000452306 1352 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.17□□□□□ -1.9
TNFSF9P41273 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.17□□□□□ -1.9
TNFSF9P41273 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFSF9P41273 RNU6-374P-201ENST00000364146 108 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
TNFSF9P41273 SNORA18.3-201ENST00000384122 132 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 MIR525-201ENST00000384978 85 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 AL121972.1-201ENST00000402023 252 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 RPS20P25-201ENST00000412447 352 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFSF9P41273 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFSF9P41273 AC073310.1-201ENST00000423226 1033 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 AC093422.3-201ENST00000428506 305 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 VDAC1P3-201ENST00000434069 851 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 B3GNT2P1-201ENST00000434960 952 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.17□□□□□ -1.9
TNFSF9P41273 RAB11AP1-201ENST00000442978 646 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFSF9P41273 TPRKBP1-201ENST00000456243 481 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 RPL21P41-201ENST00000459863 264 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 SYPL1P1-201ENST00000473622 768 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 AP000893.1-201ENST00000474462 794 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TNFSF9P41273 RNU6-488P-201ENST00000515918 99 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 AC068657.1-201ENST00000520807 306 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 AC245166.1-201ENST00000521012 253 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFSF9P41273 SYF2P1-201ENST00000550658 413 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.17□□□□□ -1.9
TNFSF9P41273 MIR3690-201ENST00000580266 75 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 HSPE1P14-201ENST00000605812 302 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 AC112503.2-201ENST00000609005 552 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 CYCSP41-201ENST00000616920 296 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 AL163051.2-201ENST00000618976 735 ntBASIC3.17□□□□□ -1.9
TNFSF9P41273 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TNFSF9P41273 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms