Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MIR3941-201ENST00000582572 103 ntBASIC5.03□□□□□ -1.6
VAMP1P23763 AC093227.2-201ENST00000589357 285 ntBASIC5.03□□□□□ -1.6
VAMP1P23763 EXOSC3P2-201ENST00000594464 497 ntBASIC5.03□□□□□ -1.6
VAMP1P23763 AC010632.3-201ENST00000611377 369 ntBASIC5.03□□□□□ -1.6
VAMP1P23763 AC104237.2-201ENST00000612456 443 ntBASIC5.03□□□□□ -1.6
VAMP1P23763 RN7SL261P-201ENST00000613441 282 ntBASIC5.03□□□□□ -1.6
VAMP1P23763 AC112487.2-201ENST00000637950 304 ntBASIC5.03□□□□□ -1.6
VAMP1P23763 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.03□□□□□ -1.6
VAMP1P23763 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.03□□□□□ -1.6
VAMP1P23763 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP1P23763 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
VAMP1P23763 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP1P23763 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VAMP1P23763 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP1P23763 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP1P23763 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
VAMP1P23763 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
VAMP1P23763 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VAMP1P23763 Z95331.1-201ENST00000623075 23112 ntBASIC5.03□□□□□ -1.6
VAMP1P23763 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VAMP1P23763 THAP12P9-201ENST00000503971 2360 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAMP1P23763 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VAMP1P23763 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.02□□□□□ -1.61
VAMP1P23763 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAMP1P23763 RNA5SP52-201ENST00000362448 134 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 RNU6-1252P-201ENST00000363054 104 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.02□□□□□ -1.61
VAMP1P23763 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.02□□□□□ -1.61
VAMP1P23763 RPL11P3-201ENST00000395256 523 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 RNA5SP431-201ENST00000410312 120 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AL591848.1-201ENST00000413092 322 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AC245096.1-201ENST00000413104 546 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 BX682237.1-201ENST00000415016 335 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 RPL21P90-201ENST00000415692 466 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 RPL7P10-201ENST00000417407 739 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 PDCL2P1-201ENST00000419302 352 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.02□□□□□ -1.61
VAMP1P23763 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.02□□□□□ -1.61
VAMP1P23763 TAAR7P-201ENST00000436141 242 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.02□□□□□ -1.61
VAMP1P23763 RPL21P41-201ENST00000459863 264 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AC005532.2-201ENST00000467154 373 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.02□□□□□ -1.61
VAMP1P23763 RN7SL369P-201ENST00000477138 299 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 RPL21P42-201ENST00000488408 464 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 TRBVA-201ENST00000498804 316 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AC079140.5-201ENST00000507882 310 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.02□□□□□ -1.61
VAMP1P23763 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.02□□□□□ -1.61
VAMP1P23763 AC004024.1-201ENST00000549244 247 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 OR11H5P-201ENST00000554039 926 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AC005519.1-201ENST00000554490 601 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.02□□□□□ -1.61
VAMP1P23763 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.02□□□□□ -1.61
VAMP1P23763 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.02□□□□□ -1.61
VAMP1P23763 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.02□□□□□ -1.61
VAMP1P23763 AL117336.2-201ENST00000602435 335 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AC020910.2-201ENST00000603635 610 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.02□□□□□ -1.61
VAMP1P23763 AC087045.1-201ENST00000605856 382 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AL133481.2-203ENST00000607558 139 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AC007497.1-201ENST00000610421 561 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AC048347.1-201ENST00000624621 427 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.02□□□□□ -1.61
VAMP1P23763 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.02□□□□□ -1.61
VAMP1P23763 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.02□□□□□ -1.61
VAMP1P23763 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
VAMP1P23763 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
VAMP1P23763 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAMP1P23763 ABCC13-202ENST00000463099 3842 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AC018809.2-201ENST00000602436 3823 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 AF117829.1-206ENST00000621883 3802 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 FAM35BP-202ENST00000497389 3337 ntBASIC5.02□□□□□ -1.61
VAMP1P23763 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VAMP1P23763 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAMP1P23763 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP1P23763 ZNF285B-201ENST00000561698 1767 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP1P23763 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP1P23763 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.01□□□□□ -1.61
VAMP1P23763 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VAMP1P23763 AC116096.1-201ENST00000566804 2314 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.01□□□□□ -1.61
VAMP1P23763 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.01□□□□□ -1.61
VAMP1P23763 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.01□□□□□ -1.61
VAMP1P23763 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAMP1P23763 RNU4-73P-201ENST00000363164 141 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 RNU6-45P-201ENST00000384471 107 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VAMP1P23763 SNORA11D-201ENST00000408548 128 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 SNORA11E-201ENST00000408778 128 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 RN7SKP91-201ENST00000410852 288 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 RN7SKP279-201ENST00000411383 298 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 AC009362.1-201ENST00000427253 406 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.01□□□□□ -1.61
VAMP1P23763 NDUFA5P4-201ENST00000436704 385 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.01□□□□□ -1.61
VAMP1P23763 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.01□□□□□ -1.61
VAMP1P23763 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms