Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH3P22223 OR4R3P-201ENST00000525084 838 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH3P22223 AL389895.1-201ENST00000554127 252 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC087465.1-201ENST00000560574 245 ntBASIC3.76□□□□□ -1.81
CDH3P22223 SULT1C2P1-202ENST00000562418 459 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH3P22223 MIR3186-201ENST00000577404 85 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH3P22223 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH3P22223 AC006130.2-201ENST00000586202 326 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH3P22223 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.76□□□□□ -1.81
CDH3P22223 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH3P22223 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH3P22223 AL592295.2-201ENST00000612578 206 ntBASIC3.76□□□□□ -1.81
CDH3P22223 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH3P22223 AC073530.2-201ENST00000623987 261 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC120349.2-201ENST00000625002 298 ntBASIC3.76□□□□□ -1.81
CDH3P22223 AC116618.1-201ENST00000634617 774 ntBASIC3.76□□□□□ -1.81
CDH3P22223 OR6C71P-202ENST00000641886 1107 ntBASIC3.76□□□□□ -1.81
CDH3P22223 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDH3P22223 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.76□□□□□ -1.81
CDH3P22223 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH3P22223 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.76□□□□□ -1.81
CDH3P22223 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
CDH3P22223 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH3P22223 RIOK3P1-201ENST00000418778 1528 ntBASIC3.75□□□□□ -1.81
CDH3P22223 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH3P22223 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH3P22223 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH3P22223 SNORA62.3-201ENST00000365110 153 ntBASIC3.75□□□□□ -1.81
CDH3P22223 RSL24D1P4-201ENST00000400938 484 ntBASIC3.75□□□□□ -1.81
CDH3P22223 SNORA3.3-201ENST00000408712 125 ntBASIC3.75□□□□□ -1.81
CDH3P22223 RN7SKP156-201ENST00000410308 342 ntBASIC3.75□□□□□ -1.81
CDH3P22223 SNORA57.3-201ENST00000411095 141 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH3P22223 AC096632.1-201ENST00000427395 310 ntBASIC3.75□□□□□ -1.81
CDH3P22223 OR51AB1P-201ENST00000429046 620 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.75□□□□□ -1.81
CDH3P22223 AC096638.2-201ENST00000434965 711 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH3P22223 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH3P22223 HMGB3P8-201ENST00000449709 577 ntBASIC3.75□□□□□ -1.81
CDH3P22223 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH3P22223 RPL12P26-201ENST00000452430 487 ntBASIC3.75□□□□□ -1.81
CDH3P22223 MTCO2P6-201ENST00000463134 685 ntBASIC3.75□□□□□ -1.81
CDH3P22223 RPL21P104-201ENST00000464143 478 ntBASIC3.75□□□□□ -1.81
CDH3P22223 RN7SL542P-201ENST00000467147 294 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AC013828.1-201ENST00000481845 158 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH3P22223 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.75□□□□□ -1.81
CDH3P22223 SAP18P1-201ENST00000512058 390 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AC087369.1-201ENST00000520775 996 ntBASIC3.75□□□□□ -1.81
CDH3P22223 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH3P22223 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH3P22223 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.75□□□□□ -1.81
CDH3P22223 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.75□□□□□ -1.81
CDH3P22223 AC090502.2-201ENST00000549267 280 ntBASIC3.75□□□□□ -1.81
CDH3P22223 HIGD1AP17-201ENST00000554576 276 ntBASIC3.75□□□□□ -1.81
CDH3P22223 DUXAP1-201ENST00000556632 463 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AL133457.1-201ENST00000564251 987 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH3P22223 AL354943.1-201ENST00000572103 781 ntBASIC3.75□□□□□ -1.81
CDH3P22223 MIR5047-201ENST00000579212 100 ntBASIC3.75□□□□□ -1.81
CDH3P22223 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.75□□□□□ -1.81
CDH3P22223 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.75□□□□□ -1.81
CDH3P22223 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.75□□□□□ -1.81
CDH3P22223 AP001521.1-201ENST00000609150 300 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AC006023.2-201ENST00000609916 167 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AC005344.1-201ENST00000613391 459 ntBASIC3.75□□□□□ -1.81
CDH3P22223 MIR8058-201ENST00000615737 89 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AC069209.1-201ENST00000619282 651 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AC120349.3-201ENST00000624377 529 ntBASIC3.75□□□□□ -1.81
CDH3P22223 AC112200.1-201ENST00000625015 234 ntBASIC3.75□□□□□ -1.81
CDH3P22223 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.75□□□□□ -1.81
CDH3P22223 MIR1322-201ENST00000638013 71 ntBASIC3.75□□□□□ -1.81
CDH3P22223 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH3P22223 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CDH3P22223 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDH3P22223 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.75□□□□□ -1.81
CDH3P22223 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CDH3P22223 CR381670.1-201ENST00000624291 1693 ntBASIC3.75□□□□□ -1.81
CDH3P22223 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 AP004289.2-201ENST00000444413 1457 ntBASIC3.74□□□□□ -1.81
CDH3P22223 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH3P22223 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CDH3P22223 Y_RNA.25-201ENST00000362528 102 ntBASIC3.74□□□□□ -1.81
CDH3P22223 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH3P22223 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 AF228730.1-201ENST00000397972 663 ntBASIC3.74□□□□□ -1.81
CDH3P22223 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 RNU6-757P-201ENST00000410334 100 ntBASIC3.74□□□□□ -1.81
CDH3P22223 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 AL139421.1-201ENST00000423010 169 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms