Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
ERCC3P19447 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.89□□□□□ -1.47
ERCC3P19447 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.89□□□□□ -1.47
ERCC3P19447 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
ERCC3P19447 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
ERCC3P19447 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.89□□□□□ -1.47
ERCC3P19447 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 RNU6-1120P-201ENST00000362988 108 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 RNU6-534P-201ENST00000364877 106 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 Y_RNA.303-201ENST00000364998 94 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC3P19447 AL137014.1-201ENST00000420490 1226 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 AL161722.2-201ENST00000434731 981 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 AL138799.3-201ENST00000438968 350 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.89□□□□□ -1.47
ERCC3P19447 AC112498.1-201ENST00000444401 332 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 PPIAP3-201ENST00000450588 505 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 NANOGP10-201ENST00000453325 895 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC3P19447 AC022364.2-201ENST00000457963 554 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 AC068305.1-201ENST00000497406 726 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.89□□□□□ -1.47
ERCC3P19447 AC008549.1-201ENST00000512900 643 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 SCARNA24.1-201ENST00000516465 137 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 RNA5SP43-201ENST00000516559 110 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.89□□□□□ -1.47
ERCC3P19447 AP005205.1-201ENST00000563503 508 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 BNIP3P30-201ENST00000601184 574 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 AL162413.1-201ENST00000603198 110 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 AC105254.2-201ENST00000603636 436 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.89□□□□□ -1.47
ERCC3P19447 AL031666.3-201ENST00000609320 1006 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 AL161616.1-201ENST00000611867 286 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 MIR3662-201ENST00000637030 95 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ERCC3P19447 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.89□□□□□ -1.47
ERCC3P19447 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.89□□□□□ -1.47
ERCC3P19447 CASC19-280ENST00000642102 1351 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 DHX40P1-201ENST00000588725 1412 ntBASIC5.89□□□□□ -1.47
ERCC3P19447 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ERCC3P19447 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.89□□□□□ -1.47
ERCC3P19447 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
ERCC3P19447 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
ERCC3P19447 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC3P19447 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC3P19447 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
ERCC3P19447 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.88□□□□□ -1.47
ERCC3P19447 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC3P19447 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC3P19447 RNU6-1097P-201ENST00000363586 107 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
ERCC3P19447 RNU6-637P-201ENST00000384050 107 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 SNORA66-201ENST00000384792 133 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 RPS3AP24-201ENST00000407896 734 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.88□□□□□ -1.47
ERCC3P19447 AC011753.3-201ENST00000443436 406 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 AC079781.2-201ENST00000446424 169 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.88□□□□□ -1.47
ERCC3P19447 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.88□□□□□ -1.47
ERCC3P19447 MTND3P10-201ENST00000450967 341 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.88□□□□□ -1.47
ERCC3P19447 AC006512.1-201ENST00000468816 291 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.88□□□□□ -1.47
ERCC3P19447 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC3P19447 AC090572.1-201ENST00000519251 160 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.88□□□□□ -1.47
ERCC3P19447 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.88□□□□□ -1.47
ERCC3P19447 AL133153.1-201ENST00000557756 303 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 MIR4270-201ENST00000581799 70 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC3P19447 NRBF2P5-201ENST00000603087 788 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 AC004067.1-201ENST00000608733 700 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC3P19447 AC063943.3-201ENST00000615562 356 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 AC083843.3-201ENST00000623679 2186 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.88□□□□□ -1.47
ERCC3P19447 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.88□□□□□ -1.47
ERCC3P19447 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
ERCC3P19447 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
ERCC3P19447 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
ERCC3P19447 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC3P19447 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
ERCC3P19447 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC3P19447 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
ERCC3P19447 Y_RNA.38-201ENST00000362617 102 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 RNU6-108P-201ENST00000365558 107 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 MIR124-3-201ENST00000384866 87 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
ERCC3P19447 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.87□□□□□ -1.47
ERCC3P19447 MRPS18BP2-201ENST00000434310 759 ntBASIC5.87□□□□□ -1.47
ERCC3P19447 RPL35AP22-201ENST00000436855 335 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms