Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CTLA4P16410 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CTLA4P16410 RNU1-35P-201ENST00000362782 153 ntBASIC2.58□□□□□ -2
CTLA4P16410 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CTLA4P16410 SNORA11-201ENST00000408789 128 ntBASIC2.58□□□□□ -2
CTLA4P16410 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.58□□□□□ -2
CTLA4P16410 RNA5SP129-201ENST00000410276 118 ntBASIC2.58□□□□□ -2
CTLA4P16410 BMS1P22-201ENST00000414726 313 ntBASIC2.58□□□□□ -2
CTLA4P16410 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.58□□□□□ -2
CTLA4P16410 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.58□□□□□ -2
CTLA4P16410 SDCBPP3-201ENST00000419629 891 ntBASIC2.58□□□□□ -2
CTLA4P16410 ARL2BPP3-201ENST00000421226 480 ntBASIC2.58□□□□□ -2
CTLA4P16410 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.58□□□□□ -2
CTLA4P16410 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.58□□□□□ -2
CTLA4P16410 RPL7P46-201ENST00000425129 740 ntBASIC2.58□□□□□ -2
CTLA4P16410 RPS7P2-201ENST00000435134 607 ntBASIC2.58□□□□□ -2
CTLA4P16410 RPS29P6-201ENST00000438196 145 ntBASIC2.58□□□□□ -2
CTLA4P16410 AL592437.1-201ENST00000443781 492 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC068135.1-201ENST00000446164 246 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.58□□□□□ -2
CTLA4P16410 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.58□□□□□ -2
CTLA4P16410 RPL21P8-201ENST00000465083 535 ntBASIC2.58□□□□□ -2
CTLA4P16410 RPL27AP5-201ENST00000469428 449 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC025181.1-201ENST00000477507 416 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.58□□□□□ -2
CTLA4P16410 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.58□□□□□ -2
CTLA4P16410 RNU1-61P-201ENST00000516107 151 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC103833.1-201ENST00000517442 172 ntBASIC2.58□□□□□ -2
CTLA4P16410 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.58□□□□□ -2
CTLA4P16410 FAM60DP-201ENST00000524174 632 ntBASIC2.58□□□□□ -2
CTLA4P16410 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.58□□□□□ -2
CTLA4P16410 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.58□□□□□ -2
CTLA4P16410 CKS1BP1-201ENST00000555221 240 ntBASIC2.58□□□□□ -2
CTLA4P16410 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.58□□□□□ -2
CTLA4P16410 AC025918.2-201ENST00000558683 763 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC107954.1-201ENST00000565906 727 ntBASIC2.58□□□□□ -2
CTLA4P16410 MTCYBP28-201ENST00000566728 1132 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC233266.2-201ENST00000567067 528 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC005951.1-201ENST00000576706 485 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC079880.2-201ENST00000603790 1213 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC135178.6-201ENST00000605314 398 ntBASIC2.58□□□□□ -2
CTLA4P16410 OR2BH1P-201ENST00000608850 864 ntBASIC2.58□□□□□ -2
CTLA4P16410 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CTLA4P16410 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.58□□□□□ -2
CTLA4P16410 AL590240.3-201ENST00000621416 943 ntBASIC2.58□□□□□ -2
CTLA4P16410 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.58□□□□□ -2
CTLA4P16410 MTND4P8-201ENST00000514997 1362 ntBASIC2.58□□□□□ -2
CTLA4P16410 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.58□□□□□ -2
CTLA4P16410 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.58□□□□□ -2
CTLA4P16410 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.58□□□□□ -2
CTLA4P16410 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CTLA4P16410 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CTLA4P16410 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.57□□□□□ -2
CTLA4P16410 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.57□□□□□ -2
CTLA4P16410 RNU6-543P-201ENST00000362576 108 ntBASIC2.57□□□□□ -2
CTLA4P16410 SNORA9.2-201ENST00000365361 133 ntBASIC2.57□□□□□ -2
CTLA4P16410 MIR181A2-201ENST00000384863 110 ntBASIC2.57□□□□□ -2
CTLA4P16410 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CTLA4P16410 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CTLA4P16410 SFR1P1-201ENST00000403720 688 ntBASIC2.57□□□□□ -2
CTLA4P16410 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.57□□□□□ -2
CTLA4P16410 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.57□□□□□ -2
CTLA4P16410 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.57□□□□□ -2
CTLA4P16410 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.57□□□□□ -2
CTLA4P16410 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.57□□□□□ -2
CTLA4P16410 AL512649.1-201ENST00000428997 581 ntBASIC2.57□□□□□ -2
CTLA4P16410 AL513175.1-201ENST00000431492 780 ntBASIC2.57□□□□□ -2
CTLA4P16410 AC007000.2-201ENST00000442564 487 ntBASIC2.57□□□□□ -2
CTLA4P16410 RPS27P5-201ENST00000444247 244 ntBASIC2.57□□□□□ -2
CTLA4P16410 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.57□□□□□ -2
CTLA4P16410 AC104978.1-201ENST00000449387 391 ntBASIC2.57□□□□□ -2
CTLA4P16410 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.57□□□□□ -2
CTLA4P16410 MRPL35P4-201ENST00000453682 566 ntBASIC2.57□□□□□ -2
CTLA4P16410 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.57□□□□□ -2
CTLA4P16410 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.57□□□□□ -2
CTLA4P16410 AC089999.1-201ENST00000460336 374 ntBASIC2.57□□□□□ -2
CTLA4P16410 AC034236.1-201ENST00000469891 373 ntBASIC2.57□□□□□ -2
CTLA4P16410 AC006483.1-201ENST00000487308 313 ntBASIC2.57□□□□□ -2
CTLA4P16410 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.57□□□□□ -2
CTLA4P16410 MTND4LP22-201ENST00000508209 276 ntBASIC2.57□□□□□ -2
CTLA4P16410 RNA5SP468-201ENST00000516782 93 ntBASIC2.57□□□□□ -2
CTLA4P16410 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.57□□□□□ -2
CTLA4P16410 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.57□□□□□ -2
CTLA4P16410 AC093014.1-201ENST00000548926 724 ntBASIC2.57□□□□□ -2
CTLA4P16410 AC027104.1-201ENST00000563702 681 ntBASIC2.57□□□□□ -2
CTLA4P16410 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.57□□□□□ -2
CTLA4P16410 OR4G1P-201ENST00000588632 938 ntBASIC2.57□□□□□ -2
CTLA4P16410 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.57□□□□□ -2
CTLA4P16410 AC012119.1-201ENST00000603184 222 ntBASIC2.57□□□□□ -2
CTLA4P16410 AC012468.1-201ENST00000604888 430 ntBASIC2.57□□□□□ -2
CTLA4P16410 AL009028.1-201ENST00000604895 802 ntBASIC2.57□□□□□ -2
CTLA4P16410 STMN1P1-201ENST00000617809 440 ntBASIC2.57□□□□□ -2
CTLA4P16410 AC022509.4-201ENST00000621404 572 ntBASIC2.57□□□□□ -2
CTLA4P16410 AC091953.5-201ENST00000622919 233 ntBASIC2.57□□□□□ -2
CTLA4P16410 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.57□□□□□ -2
CTLA4P16410 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.57□□□□□ -2
CTLA4P16410 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.57□□□□□ -2
CTLA4P16410 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.57□□□□□ -2
CTLA4P16410 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.57□□□□□ -2
CTLA4P16410 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms