Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 NDUFB9P3-201ENST00000521269 501 ntBASIC2.56□□□□□ -2
CD28P10747 OR4A45P-201ENST00000529954 901 ntBASIC2.56□□□□□ -2
CD28P10747 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.56□□□□□ -2
CD28P10747 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.56□□□□□ -2
CD28P10747 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.56□□□□□ -2
CD28P10747 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.56□□□□□ -2
CD28P10747 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
CD28P10747 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.56□□□□□ -2
CD28P10747 IGHV3-29-201ENST00000604817 344 ntBASIC2.56□□□□□ -2
CD28P10747 AC026741.1-201ENST00000605892 482 ntBASIC2.56□□□□□ -2
CD28P10747 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.56□□□□□ -2
CD28P10747 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.56□□□□□ -2
CD28P10747 AC135507.2-201ENST00000612443 309 ntBASIC2.56□□□□□ -2
CD28P10747 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.56□□□□□ -2
CD28P10747 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.56□□□□□ -2
CD28P10747 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.56□□□□□ -2
CD28P10747 AC091152.2-201ENST00000591628 2569 ntBASIC2.56□□□□□ -2
CD28P10747 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CD28P10747 ZNF542P-204ENST00000482727 1305 ntBASIC2.56□□□□□ -2
CD28P10747 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CD28P10747 ZNF734P-201ENST00000419494 1534 ntBASIC2.56□□□□□ -2
CD28P10747 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.56□□□□□ -2
CD28P10747 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CD28P10747 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.56□□□□□ -2
CD28P10747 AC093010.3-201ENST00000570269 15214 ntBASIC2.55□□□□□ -2
CD28P10747 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CD28P10747 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CD28P10747 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.55□□□□□ -2
CD28P10747 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CD28P10747 Y_RNA.110-201ENST00000363220 99 ntBASIC2.55□□□□□ -2
CD28P10747 RNU6-549P-201ENST00000384433 107 ntBASIC2.55□□□□□ -2
CD28P10747 AL122016.1-201ENST00000403365 367 ntBASIC2.55□□□□□ -2
CD28P10747 RNU4-47P-201ENST00000410876 114 ntBASIC2.55□□□□□ -2
CD28P10747 UBE2V1P9-201ENST00000414760 368 ntBASIC2.55□□□□□ -2
CD28P10747 AIMP1P1-201ENST00000418670 937 ntBASIC2.55□□□□□ -2
CD28P10747 AC096632.1-201ENST00000427395 310 ntBASIC2.55□□□□□ -2
CD28P10747 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.55□□□□□ -2
CD28P10747 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.55□□□□□ -2
CD28P10747 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.55□□□□□ -2
CD28P10747 GXYLT1P1-201ENST00000446657 490 ntBASIC2.55□□□□□ -2
CD28P10747 Z99714.1-201ENST00000450463 807 ntBASIC2.55□□□□□ -2
CD28P10747 MRPS31P2-201ENST00000451581 518 ntBASIC2.55□□□□□ -2
CD28P10747 RN7SL863P-201ENST00000462370 296 ntBASIC2.55□□□□□ -2
CD28P10747 RPL23AP67-201ENST00000465341 474 ntBASIC2.55□□□□□ -2
CD28P10747 SYPL1P1-201ENST00000473622 768 ntBASIC2.55□□□□□ -2
CD28P10747 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.55□□□□□ -2
CD28P10747 FABP5P12-201ENST00000515543 389 ntBASIC2.55□□□□□ -2
CD28P10747 IGKV2D-36-201ENST00000518643 226 ntBASIC2.55□□□□□ -2
CD28P10747 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.55□□□□□ -2
CD28P10747 AP000790.1-201ENST00000528891 737 ntBASIC2.55□□□□□ -2
CD28P10747 MTCYBP41-201ENST00000528913 1123 ntBASIC2.55□□□□□ -2
CD28P10747 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.55□□□□□ -2
CD28P10747 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.55□□□□□ -2
CD28P10747 AL136520.1-202ENST00000555494 763 ntBASIC2.55□□□□□ -2
CD28P10747 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.55□□□□□ -2
CD28P10747 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.55□□□□□ -2
CD28P10747 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.55□□□□□ -2
CD28P10747 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.55□□□□□ -2
CD28P10747 AC074051.3-201ENST00000570238 358 ntBASIC2.55□□□□□ -2
CD28P10747 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.55□□□□□ -2
CD28P10747 MIR4666A-201ENST00000580160 79 ntBASIC2.55□□□□□ -2
CD28P10747 MIR3690-201ENST00000580266 75 ntBASIC2.55□□□□□ -2
CD28P10747 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.55□□□□□ -2
CD28P10747 AL451007.1-201ENST00000595491 289 ntBASIC2.55□□□□□ -2
CD28P10747 AC018754.1-201ENST00000607486 925 ntBASIC2.55□□□□□ -2
CD28P10747 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.55□□□□□ -2
CD28P10747 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CD28P10747 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CD28P10747 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.55□□□□□ -2
CD28P10747 AC068880.4-201ENST00000623082 495 ntBASIC2.55□□□□□ -2
CD28P10747 AC106730.3-201ENST00000624568 641 ntBASIC2.55□□□□□ -2
CD28P10747 SCARNA15.3-201ENST00000626315 122 ntBASIC2.55□□□□□ -2
CD28P10747 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.55□□□□□ -2
CD28P10747 SCARNA4.1-201ENST00000628597 123 ntBASIC2.55□□□□□ -2
CD28P10747 AL121594.5-201ENST00000631724 573 ntBASIC2.55□□□□□ -2
CD28P10747 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.55□□□□□ -2
CD28P10747 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.54□□□□□ -2
CD28P10747 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.54□□□□□ -2
CD28P10747 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.54□□□□□ -2
CD28P10747 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 RPL23AP57-201ENST00000332361 466 ntBASIC2.54□□□□□ -2
CD28P10747 MIR422A-201ENST00000362286 90 ntBASIC2.54□□□□□ -2
CD28P10747 RNU6-353P-201ENST00000364266 108 ntBASIC2.54□□□□□ -2
CD28P10747 RNU6-468P-201ENST00000384003 109 ntBASIC2.54□□□□□ -2
CD28P10747 RNU6-207P-201ENST00000384137 107 ntBASIC2.54□□□□□ -2
CD28P10747 MIR649-201ENST00000384843 97 ntBASIC2.54□□□□□ -2
CD28P10747 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CD28P10747 UBA52P6-201ENST00000399822 382 ntBASIC2.54□□□□□ -2
CD28P10747 AC019070.1-201ENST00000415008 1024 ntBASIC2.54□□□□□ -2
CD28P10747 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.54□□□□□ -2
CD28P10747 TOMM22P1-201ENST00000418578 312 ntBASIC2.54□□□□□ -2
CD28P10747 MTND2P16-201ENST00000419987 799 ntBASIC2.54□□□□□ -2
CD28P10747 AL513174.1-201ENST00000423182 629 ntBASIC2.54□□□□□ -2
CD28P10747 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.54□□□□□ -2
CD28P10747 DEFB130D-201ENST00000426866 237 ntBASIC2.54□□□□□ -2
CD28P10747 AC006548.1-201ENST00000427470 102 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms